Rising HIV-1 viral load set point at a population level coincides with a fading impact of host genetic factors on HIV-1 control

AIDS. 2011 Nov 28;25(18):2217-26. doi: 10.1097/QAD.0b013e32834bec9c.

Abstract

Objective: Heterozygosity for a 32 base pair deletion in the CCR5 gene (CCR5wt/Δ32) and the minor alleles of a single-nucleotide polymorphism in the HCP5 gene (rs2395029) and in the HLA-C gene region (-35HLA-C; rs9264942) has been associated with a lower viral load set point. Recent studies have shown that over calendar time, viral load set point has significantly increased at a population level. Here we studied whether this increase coincides with a fading impact of above-mentioned host genetic markers on HIV-1 control.

Methods: We compared the association between viral load set point and HCP5 rs2395029, -35HLA-C rs9264942, and the CCR5wt/Δ32 genotype in HIV-1-infected individuals in the Netherlands who had seroconverted between 1982 and 2002 (pre-2003 seroconverters, n = 459) or between 2003 and 2009 (post-2003 seroconverters, n = 231).

Results: Viral load set point in post-2003 seroconverters was significantly higher than in pre-2003 seroconverters (P = 4.5 × 10(-5)). The minor alleles for HCP5 rs2395029, -35HLA-C rs9264942 and CCR5wt/Δ32 had a similar prevalence in both groups and were all individually associated with a significantly lower viral load set point in pre-2003 seroconverters. In post-2003 seroconverters, this association was no longer observed for HCP5 rs2395029 and CCR5wt/Δ32. The association between viral load set point and HCP5 rs2395029 had significantly changed over time, whereas the change in impact of the CCR5wt/Δ32 genotype over calendar time was not independent from the other markers under study.

Conclusion: The increased viral load set point at a population level coincides with a lost impact of certain host genetic factors on HIV-1 control.

MeSH terms

  • Cohort Studies
  • Disease Progression
  • Female
  • HIV Seropositivity / genetics
  • HIV Seropositivity / immunology
  • HIV-1 / genetics
  • HIV-1 / immunology*
  • HLA-C Antigens / genetics*
  • HLA-C Antigens / immunology
  • Humans
  • Major Histocompatibility Complex / genetics*
  • Major Histocompatibility Complex / immunology
  • Male
  • Netherlands
  • Polymorphism, Single Nucleotide
  • RNA, Long Noncoding
  • RNA, Untranslated
  • Receptors, CCR5 / genetics*
  • Receptors, CCR5 / immunology
  • Time Factors
  • Viral Load / genetics
  • Viral Load / immunology
  • Viral Load / trends*

Substances

  • HCP5 long noncoding RNA, human
  • HLA-C Antigens
  • RNA, Long Noncoding
  • RNA, Untranslated
  • Receptors, CCR5