Development of a non-targeted metabolomics method to investigate urine in a rat model of polycystic kidney disease

Nephrology (Carlton). 2012 Feb;17(2):104-10. doi: 10.1111/j.1440-1797.2011.01532.x.

Abstract

Aim: The purpose of this research was to use metabolomics to investigate the cystic phenotype in the Lewis polycystic kidney rat.

Methods: Spot urine samples were collected from four male Lewis control and five male Lewis polycystic kidney rats aged 5 weeks, before kidney function was significantly impaired. Metabolites were extracted from urine and analysed using gas chromatography-mass spectrometry. Principal component analysis was used to determine key metabolites contributing to the variance observed between sample groups.

Results: With the development of a metabolomics method to analyse Lewis and Lewis polycystic kidney rat urine, 2-ketoglutaric acid, allantoin, uric acid and hippuric acid were identified as potential biomarkers of cystic disease in the rat model.

Conclusion: The findings of this study demonstrate the potential of metabolomics to further investigate kidney disease.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Allantoin / urine
  • Animals
  • Biomarkers / urine
  • Disease Models, Animal
  • Gas Chromatography-Mass Spectrometry
  • Hippurates / urine
  • Ketoglutaric Acids / urine
  • Male
  • Metabolomics* / methods
  • Phenotype
  • Polycystic Kidney Diseases / urine*
  • Principal Component Analysis
  • Rats
  • Rats, Inbred Lew
  • Uric Acid / urine
  • Urinalysis

Substances

  • Biomarkers
  • Hippurates
  • Ketoglutaric Acids
  • Uric Acid
  • Allantoin
  • hippuric acid