Signalling networks regulate essentially all of the biology of cells and organisms under physiological and pathological states. Analysis of signalling networks by classical biochemical approaches such as antibody-based techniques is limited for large-scale and unbiased studies. Proteomics technique based on mass spectrometry now enables the system-wide characterization of signalling events at the levels of post-translational modifications, protein complex and changes in protein expression. This function can complement the system-side gene expression analysis since the expression of many proteins is regulated by posttranscriptional mechanisms. The application of these technologies provided a quantum leap in our understanding of the molecular properties of signalling networks in recently years.
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