Cooperative assembly and dynamic disassembly of MDA5 filaments for viral dsRNA recognition

Proc Natl Acad Sci U S A. 2011 Dec 27;108(52):21010-5. doi: 10.1073/pnas.1113651108. Epub 2011 Dec 12.

Abstract

MDA5, an RIG-I-like helicase, is a conserved cytoplasmic viral RNA sensor, which recognizes dsRNA from a wide-range of viruses in a length-dependent manner. It has been proposed that MDA5 forms higher-order structures upon viral dsRNA recognition or during antiviral signaling, however the organization and nature of this proposed oligomeric state is unknown. We report here that MDA5 cooperatively assembles into a filamentous oligomer composed of a repeating segmental arrangement of MDA5 dimers along the length of dsRNA. Binding of MDA5 to dsRNA stimulates its ATP hydrolysis activity with little coordination between neighboring molecules within a filament. Individual ATP hydrolysis in turn renders an intrinsic kinetic instability to the MDA5 filament, triggering dissociation of MDA5 from dsRNA at a rate inversely proportional to the filament length. These results suggest a previously unrecognized role of ATP hydrolysis in control of filament assembly and disassembly processes, thereby autoregulating the interaction of MDA5 with dsRNA, and provides a potential basis for dsRNA length-dependent antiviral signaling.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / metabolism
  • DEAD-box RNA Helicases / genetics
  • DEAD-box RNA Helicases / metabolism*
  • Dimerization
  • Electrophoresis / methods
  • Encephalomyocarditis virus / genetics
  • Humans
  • Hydrolysis
  • Image Processing, Computer-Assisted
  • Interferon-Induced Helicase, IFIH1
  • Mengovirus / genetics
  • Microscopy, Electron
  • Mutation, Missense / genetics
  • Protein Conformation*
  • RNA, Double-Stranded / metabolism*
  • RNA, Viral / metabolism*
  • Receptors, Pattern Recognition / genetics
  • Receptors, Pattern Recognition / metabolism*

Substances

  • RNA, Double-Stranded
  • RNA, Viral
  • Receptors, Pattern Recognition
  • Adenosine Triphosphate
  • IFIH1 protein, human
  • DEAD-box RNA Helicases
  • Interferon-Induced Helicase, IFIH1