Isolates belonging to CDC group II-i belong predominantly to Sphingobacterium mizutaii Yabuuchi et al. 1983: emended descriptions of S. mizutaii and of the genus Sphingobacterium

Int J Syst Evol Microbiol. 2012 Nov;62(Pt 11):2598-2601. doi: 10.1099/ijs.0.037325-0. Epub 2011 Dec 23.

Abstract

Two clinical strains, NF 296 and NF 931, present in our collection, were identified biochemically as members of CDC group II-i. Determination of the 16S rRNA gene sequence revealed highest similarity with strains of Sphingobacterium mizutaii. Because these strains produced indole, whereas S. mizutaii has been described as indole-negative, we also investigated the type strain and a reference strain of S. mizutaii, LMG 8340(T) (=CCUG 15907(T)) and LMG 8341 (=CCUG 15908), and found both strains also to be positive for indole production. These data warrant inclusion of some of the CDC group II-i strains into S. mizutaii and emended descriptions of Sphingobacterium mizutaii as indole-production-positive and of the genus Sphingobacterium as variable for indole production.

MeSH terms

  • Bacterial Typing Techniques
  • DNA, Bacterial / genetics
  • Fatty Acids / analysis
  • Indoles / metabolism*
  • Molecular Sequence Data
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Sphingobacterium / classification*
  • Sphingobacterium / genetics
  • Sphingobacterium / metabolism

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Indoles
  • RNA, Ribosomal, 16S
  • indole

Associated data

  • GENBANK/JF708885
  • GENBANK/JF708886
  • GENBANK/JF708887
  • GENBANK/JF708888
  • GENBANK/JF708889
  • GENBANK/JF708890