Draft genome sequence of Marinobacterium stanieri S30, a strain isolated from a coastal lagoon in Chuuk state in Micronesia

J Bacteriol. 2012 Mar;194(5):1260. doi: 10.1128/JB.06703-11.

Abstract

In this study, we isolated xylan-degrading bacteria from a coastal lagoon of Micronesia and identified the bacteria as Marinobacterium stanieri S30. GSFLX 454 pyrosequencing and sequence analysis of the M. stanieri S30 genome generated 4,007 predicted open reading frames (ORFs) that could be candidate genes for producing enzymes with different catalytic functions.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Alteromonadaceae / genetics*
  • Alteromonadaceae / isolation & purification*
  • Alteromonadaceae / metabolism
  • DNA, Bacterial / chemistry*
  • DNA, Bacterial / genetics*
  • Genome, Bacterial*
  • Micronesia
  • Molecular Sequence Data
  • Open Reading Frames
  • Seawater / microbiology*
  • Sequence Analysis, DNA
  • Xylans / metabolism

Substances

  • DNA, Bacterial
  • Xylans

Associated data

  • GENBANK/AFPL00000000