Human bocavirus amongst an all-ages population hospitalised with acute lower respiratory infections in Cambodia

Influenza Other Respir Viruses. 2013 Mar;7(2):201-10. doi: 10.1111/j.1750-2659.2012.00369.x. Epub 2012 Apr 25.

Abstract

Background: Human bocavirus (HBoV) is a novel parvovirus that is associated with respiratory and gastrointestinal tract disease.

Objectives: To investigate the prevalence and genetic diversity of HBoV amongst hospitalized patients with acute lower respiratory infection (ALRI) in Cambodia.

Study design: Samples were collected from 2773 patients of all ages hospitalised with symptoms of ALRI between 2007 and 2009. All samples were screened by multiplex RT-PCR/PCR for 18 respiratory viruses. All samples positive for HBoV were sequenced and included in this study.

Results: Of the samples tested, 43 (1·5%) were positive for HBoV. The incidence of HBoV did not vary between the consecutive seasons investigated, and HBoV infections were detected year-round. The incidence of HBoV infection was highest in patients aged < 2 years, with pneumonia or bronchopneumonia the most common clinical diagnosis, regardless of age. A total of 19 patients (44%) were co-infected with HBoV and an additional respiratory pathogen. All isolates were classified as HBoV type 1 (HBoV-1). High conservation between Cambodian NP1 and V1V2 gene sequences was observed.

Conclusions: Human bocavirus infection can result in serious illness, however is frequently detected in the context of viral co-infection. Specific studies are required to further understand the true pathogenesis of HBoV in the context of severe respiratory illness.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Adult
  • Cambodia / epidemiology
  • Child
  • Child, Preschool
  • Cluster Analysis
  • DNA, Viral / chemistry
  • DNA, Viral / genetics
  • Female
  • Genetic Variation
  • Genotype
  • Hospitalization
  • Human bocavirus / classification
  • Human bocavirus / genetics
  • Human bocavirus / isolation & purification*
  • Humans
  • Infant
  • Male
  • Middle Aged
  • Molecular Sequence Data
  • Parvoviridae Infections / epidemiology*
  • Parvoviridae Infections / virology
  • Prevalence
  • Respiratory Tract Infections / epidemiology*
  • Respiratory Tract Infections / virology
  • Sequence Analysis, DNA
  • Young Adult

Substances

  • DNA, Viral

Associated data

  • GENBANK/JQ618248
  • GENBANK/JQ618249
  • GENBANK/JQ618250
  • GENBANK/JQ618251
  • GENBANK/JQ618252
  • GENBANK/JQ618253
  • GENBANK/JQ618254
  • GENBANK/JQ618255
  • GENBANK/JQ618256
  • GENBANK/JQ618257
  • GENBANK/JQ618258
  • GENBANK/JQ618259
  • GENBANK/JQ618260
  • GENBANK/JQ618261
  • GENBANK/JQ618262
  • GENBANK/JQ618263
  • GENBANK/JQ618264
  • GENBANK/JQ618265
  • GENBANK/JQ618266
  • GENBANK/JQ618267
  • GENBANK/JQ618268
  • GENBANK/JQ618269
  • GENBANK/JQ618270
  • GENBANK/JQ618271
  • GENBANK/JQ618272
  • GENBANK/JQ618273
  • GENBANK/JQ618274
  • GENBANK/JQ618275
  • GENBANK/JQ618276
  • GENBANK/JQ618277
  • GENBANK/JQ618278