Complementarity between the 5'- and 3'-terminal sequences of rice stripe virus RNAs

J Gen Virol. 1990 Dec:71 ( Pt 12):2817-21. doi: 10.1099/0022-1317-71-12-2817.

Abstract

The 5' and 3' termini of four ssRNA species of rice stripe virus (RSV) isolate T were sequenced. The 3' termini of the three smallest ssRNAs, i.e. RNAs 2, 3 and 4, had the sequence 5' GACUUUGUGU 3'; that of ssRNA 1 had the sequence 5' GACUAUGUGU 3'. The 5'-terminal sequences of all four ssRNAs were 5' ACACAAAGUCC 3'. The 5'- and 3'-terminal sequences of about 20 bases of each ssRNA were almost complementary to each other. It is possible that RSV RNAs form panhandle structures characteristic of the RNA of negative-strand viruses.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adenosine Triphosphate / metabolism
  • Autoradiography
  • Base Sequence
  • Molecular Sequence Data
  • Oryza
  • Phosphorus Radioisotopes
  • Plant Viruses / genetics*
  • Plant Viruses / isolation & purification
  • RNA, Viral / genetics*
  • RNA, Viral / isolation & purification

Substances

  • Phosphorus Radioisotopes
  • RNA, Viral
  • Adenosine Triphosphate