Genomic characterization and expression profiles upon bacterial infection of a novel cystatin B homologue from disk abalone (Haliotis discus discus)

Dev Comp Immunol. 2012 Dec;38(4):495-504. doi: 10.1016/j.dci.2012.06.010. Epub 2012 Aug 7.

Abstract

Cystatins are a large family of cysteine proteinase inhibitors which are involved in diverse biological and pathological processes. In the present study, we identified a gene related to cystatin superfamily, AbCyt B, from disk abalone Haliotis discus discus by expressed sequence tag (EST) analysis and BAC library screening. The complete cDNA sequence of AbCyt B is comprised of 1967 nucleotides with a 306 bp open reading frame (ORF) encoding for 101 amino acids. The amino acid sequence consists of a single cystatin-like domain, which has a cysteine proteinase inhibitor signature, a conserved Gly in N-terminal region, QVVAG motif and a variant of PW motif. No signal peptide, disulfide bonds or carbohydrate side chains were identified. Analysis of deduced amino acid sequence revealed that AbCyt B shares up to 44.7% identity and 65.7% similarity with the cystatin B genes from other organisms. The genomic sequence of AbCyt B is approximately 8.4 Kb, consisting of three exons and two introns. Phylogenetic tree analysis showed that AbCyt B was closely related to the cystatin B from pacific oyster (Crassostrea gigas) under the family 1.Functional analysis of recombinant AbCyt B protein exhibited inhibitory activity against the papain, with almost 84% inhibition at a concentration of 3.5 μmol/L. In tissue expression analysis, AbCyt B transcripts were expressed abundantly in the hemocyte, gill, mantle, and digestive tract, while weakly in muscle, testis, and hepatopancreas. After the immune challenge with Vibrio parahemolyticus, the AbCyt B showed significant (P<0.05) up-regulation of relative mRNA expression in gill and hemocytes at 24 and 6 h of post infection, respectively. These results collectively suggest that AbCyst B is a potent inhibitor of cysteine proteinases and is also potentially involved in immune responses against invading bacterial pathogens in abalone.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Cloning, Molecular
  • Computer Simulation
  • Cystatin B / chemistry
  • Cystatin B / genetics*
  • Cystatin B / metabolism
  • Gastropoda / genetics*
  • Gastropoda / metabolism
  • Gastropoda / microbiology
  • Gene Expression Regulation*
  • Genome*
  • Hemocytes / metabolism
  • Host-Pathogen Interactions
  • Models, Molecular
  • Molecular Sequence Data
  • Organ Specificity
  • Papain / antagonists & inhibitors
  • Papain / chemistry
  • Phylogeny
  • Proteolysis
  • Sequence Analysis, DNA
  • Sequence Homology, Amino Acid
  • Structural Homology, Protein
  • Vibrio parahaemolyticus / physiology

Substances

  • Cystatin B
  • Papain

Associated data

  • GENBANK/JQ653304