Selection of key ambient particulate variables for epidemiological studies - applying cluster and heatmap analyses as tools for data reduction

Sci Total Environ. 2012 Oct 1:435-436:541-50. doi: 10.1016/j.scitotenv.2012.07.040. Epub 2012 Aug 12.

Abstract

The success of epidemiological studies depends on the use of appropriate exposure variables. The purpose of this study is to extract a relatively small selection of variables characterizing ambient particulate matter from a large measurement data set. The original data set comprised a total of 96 particulate matter variables that have been continuously measured since 2004 at an urban background aerosol monitoring site in the city of Augsburg, Germany. Many of the original variables were derived from measured particle size distribution (PSD) across the particle diameter range 3 nm to 10 μm, including size-segregated particle number concentration, particle length concentration, particle surface concentration and particle mass concentration. The data set was complemented by integral aerosol variables. These variables were measured by independent instruments, including black carbon, sulfate, particle active surface concentration and particle length concentration. It is obvious that such a large number of measured variables cannot be used in health effect analyses simultaneously. The aim of this study is a pre-screening and a selection of the key variables that will be used as input in forthcoming epidemiological studies. In this study, we present two methods of parameter selection and apply them to data from a two-year period from 2007 to 2008. We used the agglomerative hierarchical cluster method to find groups of similar variables. In total, we selected 15 key variables from 9 clusters which are recommended for epidemiological analyses. We also applied a two-dimensional visualization technique called "heatmap" analysis to the Spearman correlation matrix. 12 key variables were selected using this method. Moreover, the positive matrix factorization (PMF) method was applied to the PSD data to characterize the possible particle sources. Correlations between the variables and PMF factors were used to interpret the meaning of the cluster and the heatmap analyses.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Air Pollutants / analysis
  • Air Pollution / analysis
  • Cities
  • Cluster Analysis*
  • Data Interpretation, Statistical*
  • Environmental Monitoring / instrumentation
  • Environmental Monitoring / methods
  • Epidemiologic Methods*
  • Germany
  • Humans
  • Models, Chemical
  • Particle Size
  • Particulate Matter / analysis*
  • Vehicle Emissions / analysis

Substances

  • Air Pollutants
  • Particulate Matter
  • Vehicle Emissions