Expanding the DNA alphabet in the fruit fly: uracil enrichment in genomic DNA

Fly (Austin). 2013 Jan-Mar;7(1):23-7. doi: 10.4161/fly.23192. Epub 2012 Dec 13.

Abstract

DNA integrity is under the control of multiple pathways of nucleotide metabolism and DNA damage recognition and repair. Unusual sets of protein factors involved in these control mechanisms may result in tolerance and accumulation of non-canonical bases within the DNA. We investigate the presence of uracil in genomic DNA of Drosophila melanogaster. Results indicate a developmental pattern and strong correlations between uracil-DNA levels, dUTPase expression and developmental fate of different tissues. The intriguing lack of the catalytically most efficient uracil-DNA glycosylase in Drosophila melanogaster may be a general attribute of Holometabola and is suggested to be involved in the specific characteristics of uracil-DNA metabolism in these insects.

Keywords: dUTPase; metamorphosis; pupating insect; tissue-specific; uracil.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • DNA / chemistry*
  • DNA / metabolism
  • DNA Repair
  • Drosophila melanogaster / genetics*
  • Drosophila melanogaster / growth & development
  • Gene Silencing
  • Genome*
  • Pyrophosphatases / genetics
  • Pyrophosphatases / physiology
  • Uracil / chemistry*
  • Uracil / metabolism
  • Uracil / physiology
  • Uracil-DNA Glycosidase / genetics
  • Uracil-DNA Glycosidase / metabolism
  • Uracil-DNA Glycosidase / physiology
  • Wings, Animal / cytology
  • Wings, Animal / growth & development
  • Wings, Animal / metabolism

Substances

  • Uracil
  • DNA
  • Uracil-DNA Glycosidase
  • Pyrophosphatases
  • dUTP pyrophosphatase