Silencing of the human SET gene in vitro with lentivirus-mediated RNA interference

Mol Med Rep. 2013 Mar;7(3):843-7. doi: 10.3892/mmr.2013.1275. Epub 2013 Jan 15.

Abstract

In our previous study, SET was identified as one of the differentially expressed proteins that was associated with tetra-arsenic tetra-sulfide (As4S4)-induced NB4-R1 [retinoic acid-resistant acute promyelocytic leukemia (APL) cell line] apoptosis. However, the mechanism through which SET regulates pathways during this process remains unclear. The aim of this study was to construct lentivirus-mediated short hairpin RNA (shRNA) against SET and investigate the effect of SET on As4S4-induced retinoic acid-resistant APL cell apoptosis. In the present study, 4 different oligonucleotides targeting the human SET gene were synthesized and cloned into the eukaryotic expression plasmid pGCSIL-GFP. The recombinant vectors were introduced into NB4-R1 cells. The silencing efficiency was measured by real-time quantitative PCR (RT-qPCR) and western blotting. Our results showed that the 4 recombinant RNA interference (RNAi) vectors were constructed successfully. Fluorescence microscopy demonstrated that infection efficiency ranged from 70 to 90%. Infection with the 4 different RNAi vectors significantly knocked down the expression of SET by 52.8, 69.1, 48.9 and 90.3% at the mRNA level, and 92.5, 96.3, 91.7 and 98.4% at the protein level, respectively. We attempt to clarify the mechanism of As4S4 treatment on retinoic acid-resistant APL.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Apoptosis / drug effects
  • Cell Line, Tumor
  • DNA-Binding Proteins
  • Genetic Vectors / genetics
  • Genetic Vectors / metabolism
  • Histone Chaperones / antagonists & inhibitors
  • Histone Chaperones / genetics
  • Histone Chaperones / metabolism*
  • Humans
  • Lentivirus / genetics
  • Leukemia, Promyelocytic, Acute / metabolism
  • Leukemia, Promyelocytic, Acute / pathology
  • RNA Interference*
  • RNA, Messenger / metabolism
  • RNA, Small Interfering / metabolism
  • Transcription Factors / antagonists & inhibitors
  • Transcription Factors / genetics
  • Transcription Factors / metabolism*
  • Tretinoin / pharmacology

Substances

  • DNA-Binding Proteins
  • Histone Chaperones
  • RNA, Messenger
  • RNA, Small Interfering
  • SET protein, human
  • Transcription Factors
  • Tretinoin