The role of Arabidopsis thaliana NAR1, a cytosolic iron-sulfur cluster assembly component, in gametophytic gene expression and oxidative stress responses in vegetative tissue

New Phytol. 2013 Sep;199(4):925-935. doi: 10.1111/nph.12350. Epub 2013 Jun 5.

Abstract

Iron-sulfur proteins have iron-sulfur clusters as a prosthetic group and are responsible for various cellular processes, including general transcriptional regulation, photosynthesis and respiration. The cytosolic iron-sulfur assembly (CIA) pathway of yeast has been shown to be responsible for regulation of iron-sulfur cluster assembly in both the cytosol and the nucleus. However, little is known about the roles of this pathway in multicellular organisms. In a forward genetic screen, we identified an Arabidopsis thaliana mutant with impaired expression of the endosperm-specific gene Flowering Wageningen (FWA). To characterize this mutant, we carried out detailed phenotypic and genetic analyses during reproductive and vegetative development. The mutation affects NAR1, which encodes a homolog of a yeast CIA pathway component. Comparison of embryo development in nar1-3 and other A. thaliana mutants affected in the CIA pathway showed that the embryos aborted at a similar stage, suggesting that this pathway potentially functions in early seed development. Transcriptome analysis of homozygous viable nar1-4 seedlings showed transcriptional repression of a subset of genes involved in 'iron ion transport' and 'response to nitrate'. nar1-4 also exhibited resistance to the herbicide paraquat. Our results indicate that A. thaliana NAR1 has various functions including transcriptional regulation in gametophytes and abiotic stress responses in vegetative tissues.

Keywords: Arabidopsis thaliana; cytosolic iron-sulfur (Fe-S) cluster assembly; endosperm; imprinted gene; paraquat resistance.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Aconitate Hydratase / metabolism
  • Alleles
  • Arabidopsis / cytology
  • Arabidopsis / genetics*
  • Arabidopsis / growth & development
  • Arabidopsis Proteins / genetics
  • Arabidopsis Proteins / metabolism*
  • Crosses, Genetic
  • Cytosol / metabolism*
  • Endosperm / cytology
  • Endosperm / metabolism
  • Gene Expression Regulation, Developmental
  • Gene Expression Regulation, Plant
  • Genes, Plant / genetics
  • Genomic Imprinting
  • Germ Cells, Plant / cytology
  • Germ Cells, Plant / metabolism*
  • Green Fluorescent Proteins / metabolism
  • Heterozygote
  • Iron-Sulfur Proteins / genetics
  • Iron-Sulfur Proteins / metabolism*
  • Mutation / genetics
  • Oxidative Stress / genetics*
  • Paraquat / toxicity
  • Phenotype
  • Pollination
  • Recombinant Fusion Proteins / metabolism
  • Reverse Transcriptase Polymerase Chain Reaction
  • Seeds / embryology
  • Seeds / metabolism

Substances

  • Arabidopsis Proteins
  • Iron-Sulfur Proteins
  • NAR1 protein, Arabidopsis
  • Recombinant Fusion Proteins
  • Green Fluorescent Proteins
  • Aconitate Hydratase
  • Paraquat