Surugamides A-E, cyclic octapeptides with four D-amino acid residues, from a marine Streptomyces sp.: LC-MS-aided inspection of partial hydrolysates for the distinction of D- and L-amino acid residues in the sequence

J Org Chem. 2013 Jul 5;78(13):6746-50. doi: 10.1021/jo400708u. Epub 2013 Jun 20.

Abstract

Surugamides A-E (1-5), cyclic octapeptides with four D-amino acid residues, were isolated from the broth of marine-derived Streptomyces sp. Their planar structures were determined by analyses of spectroscopic data, and the absolute configuration of constituent amino acid residues was determined by the Marfey's method. Differentiation of D-Ile and L-Ile in the sequence was established by chiral analysis of fragment peptides obtained from the partial hydrolysate, whose identification was conducted by LC-MS/MS.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acids / chemistry*
  • Chromatography, Liquid
  • Hydrolysis
  • Molecular Conformation
  • Peptides, Cyclic / chemistry
  • Peptides, Cyclic / isolation & purification*
  • Stereoisomerism
  • Streptomyces / chemistry*
  • Tandem Mass Spectrometry

Substances

  • Amino Acids
  • Peptides, Cyclic