Duplex realtime PCR method for Epstein-Barr virus and human DNA quantification: its application for post-transplant lymphoproliferative disorders detection

Braz J Infect Dis. 2014 May-Jun;18(3):271-80. doi: 10.1016/j.bjid.2013.07.011. Epub 2014 Jan 2.

Abstract

Introduction: The quantification of circulating Epstein-Barr virus (EBV) DNA is used to monitor transplant patients as an early marker of Post-Transplant Lymphoproliferative Disorders (PTLD). So far no standardized methodology exists for such determination.

Objective: Our purpose was to develop and validate a real-time PCR assay to quantify EBV DNA in clinical samples from transplant recipients.

Methods: A duplex real-time PCR method was developed to amplify DNA from EBV and from a human gene. The EBV load was determined in peripheral blood mononuclear cells (PBMC), plasma and oropharyngeal tissue from 64 non-transplanted patients with lymphoid-hypertrophy (Non-Tx), 47 transplant recipients without PTLD (Tx), 54 recipients with PTLD (Tx-PTLD), and 66 blood donors (BD). WinPEPI, version 11.14 software was used for statistical analysis.

Results: Analytical validation: the intra and inter-assays variation coefficients were less than 4.5% (EBV-reaction) and 3% (glyceraldehyde 3-phosphate dehydrogenase - GAPDH reaction). Linear ranges comprised 10(7)-10 EBV genome equivalents (gEq) (EBV-reaction) and 500,000-32 human gEq (GAPDH-reaction). The detection limit was 2.9 EBV gEq (EBV-reaction). Both reactions showed specificity. Application to clinical samples: higher levels of EBV were found in oropharyngeal tissue from transplanted groups with and without PTLD, compared to Non-Tx (p<0.05). The EBV load in PBMC from the groups of BD, Non-Tx, Tx and Tx-PTLD exhibited increasing levels (p<0.05). In BD, PBMC and plasma, EBV loads were undetectable.

Conclusions: The performance of the assay was suitable for the required clinical application. The assay may be useful to monitor EBV infection in transplant patients, in particular in laboratories from low-income regions that cannot afford to use commercial assays.

Keywords: EBV; PTLD; real-time PCR; viral load.

Publication types

  • Research Support, Non-U.S. Gov't
  • Validation Study

MeSH terms

  • Adolescent
  • Adult
  • Child
  • Child, Preschool
  • DNA, Viral / blood*
  • Epstein-Barr Virus Infections / diagnosis*
  • Female
  • Heart Transplantation / adverse effects*
  • Herpesvirus 4, Human / genetics*
  • Humans
  • Infant
  • Kidney Transplantation / adverse effects*
  • Liver Transplantation / adverse effects*
  • Lymphoproliferative Disorders / diagnosis*
  • Lymphoproliferative Disorders / virology
  • Male
  • Middle Aged
  • Real-Time Polymerase Chain Reaction
  • Sensitivity and Specificity
  • Viral Load
  • Young Adult

Substances

  • DNA, Viral