CLP1 founder mutation links tRNA splicing and maturation to cerebellar development and neurodegeneration

Cell. 2014 Apr 24;157(3):651-63. doi: 10.1016/j.cell.2014.03.049.

Abstract

Neurodegenerative diseases can occur so early as to affect neurodevelopment. From a cohort of more than 2,000 consanguineous families with childhood neurological disease, we identified a founder mutation in four independent pedigrees in cleavage and polyadenylation factor I subunit 1 (CLP1). CLP1 is a multifunctional kinase implicated in tRNA, mRNA, and siRNA maturation. Kinase activity of the CLP1 mutant protein was defective, and the tRNA endonuclease complex (TSEN) was destabilized, resulting in impaired pre-tRNA cleavage. Germline clp1 null zebrafish showed cerebellar neurodegeneration that was rescued by wild-type, but not mutant, human CLP1 expression. Patient-derived induced neurons displayed both depletion of mature tRNAs and accumulation of unspliced pre-tRNAs. Transfection of partially processed tRNA fragments into patient cells exacerbated an oxidative stress-induced reduction in cell survival. Our data link tRNA maturation to neuronal development and neurodegeneration through defective CLP1 function in humans.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Brain / metabolism
  • Brain / pathology
  • Cerebellum / growth & development*
  • Cerebellum / pathology*
  • Cleavage And Polyadenylation Specificity Factor / genetics
  • Cleavage And Polyadenylation Specificity Factor / metabolism*
  • Female
  • Humans
  • Male
  • Mice
  • Models, Molecular
  • Neurodegenerative Diseases / genetics
  • Neurodegenerative Diseases / pathology
  • Nuclear Proteins / genetics*
  • Nuclear Proteins / metabolism
  • Pedigree
  • Phosphotransferases / genetics*
  • Phosphotransferases / metabolism
  • RNA Splicing*
  • RNA, Transfer / genetics*
  • RNA, Transfer / metabolism
  • Saccharomyces cerevisiae / metabolism
  • Transcription Factors / genetics*
  • Transcription Factors / metabolism
  • Zebrafish
  • Zebrafish Proteins / genetics
  • Zebrafish Proteins / metabolism*

Substances

  • Cleavage And Polyadenylation Specificity Factor
  • Nuclear Proteins
  • Transcription Factors
  • Zebrafish Proteins
  • RNA, Transfer
  • CLP1 protein, human
  • CLP1 protein, zebrafish
  • Phosphotransferases

Associated data

  • dbGaP/PHS000288