Purification, crystallization and preliminary X-ray diffraction analysis of GatD, a glutamine amidotransferase-like protein from Staphylococcus aureus peptidoglycan

Acta Crystallogr F Struct Biol Commun. 2014 May;70(Pt 5):632-5. doi: 10.1107/S2053230X14007298. Epub 2014 Apr 17.

Abstract

Amidation of peptidoglycan is an essential feature in Staphylococcus aureus that is necessary for resistance to β-lactams and lysozyme. GatD, a 27 kDa type I glutamine amidotransferase-like protein, together with MurT ligase, catalyses the amidation reaction of the glutamic acid residues of the peptidoglycan of S. aureus. The native and the selenomethionine-derivative proteins were crystallized using the sitting-drop vapour-diffusion method with polyethylene glycol, sodium acetate and calcium acetate. The crystals obtained diffracted beyond 1.85 and 2.25 Å, respectively, and belonged to space group P212121. X-ray diffraction data sets were collected at Diamond Light Source (on beamlines I02 and I04) and were used to obtain initial phases.

Keywords: GatD; Staphylococcus aureus; glutamine amidotransferase-like protein.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Crystallization
  • Molecular Sequence Data
  • Peptidoglycan / chemistry*
  • Peptidoglycan / genetics
  • Peptidoglycan / isolation & purification
  • Staphylococcus aureus / enzymology*
  • Staphylococcus aureus / genetics
  • Transaminases / chemistry*
  • Transaminases / genetics
  • Transaminases / isolation & purification
  • X-Ray Diffraction

Substances

  • Peptidoglycan
  • Transaminases
  • glutamine-pyruvate aminotransferase