The structure of a far-red fluorescent protein, AQ143, shows evidence in support of reported red-shifting chromophore interactions

Protein Sci. 2014 Aug;23(8):1148-53. doi: 10.1002/pro.2498. Epub 2014 Jun 14.

Abstract

Engineering fluorescent proteins (FPs) to emit light at longer wavelengths is a significant focus in the development of the next generation of fluorescent biomarkers, as far-red light penetrates tissue with minimal absorption, allowing better imaging inside of biological hosts. Structure-guided design and directed evolution have led to the discovery of red FPs with significant bathochromic shifts to their emission. Here, we present the crystal structure of one of the most bathochromically shifted FPs reported to date, AQ143, a nine-point mutant of aeCP597, a chromoprotein from Actinia equina. The 2.19 Å resolution structure reveals several important chromophore interactions that contribute to the protein's far-red emission and shows dual occupancy of the green and red chromophores.

Keywords: chromoprotein; near-infrared, bathochromic shift; red fluorescent protein.

MeSH terms

  • Animals
  • Crystallography, X-Ray
  • Luminescent Proteins / chemistry*
  • Luminescent Proteins / genetics
  • Luminescent Proteins / isolation & purification
  • Models, Molecular
  • Point Mutation
  • Protein Conformation
  • Protein Engineering
  • Red Fluorescent Protein
  • Sea Anemones

Substances

  • Luminescent Proteins

Associated data

  • PDB/1A50
  • PDB/3IP2
  • PDB/4EDO
  • PDB/4EDS
  • PDB/4KGF
  • PDB/4OQW