Transcription of the chicken myb proto-oncogene starts within a CpG island

Nucleic Acids Res. 1989 Jul 25;17(14):5651-64. doi: 10.1093/nar/17.14.5651.

Abstract

The nucleotide sequence of an 8.2-kb DNA fragment from the 5' proximal part of the chicken myb proto-oncogene spanning 1761 nucleotides upstream and 6436 nucleotides downstream from a presumed c-myb initiation codon was determined. A 3.3-kb G + C-rich region found in this sequence had also other features characterizing CpG islands, i.e. no CpG underrepresentation and lack of CpG methylation. In haematopoietic tissues c-myb mRNA synthesis starts in two major regions of the CpG island, namely 98 to 108 and 143 to 145 nucleotides upstream from the c-myb initiation codon. These two regions are in or close to the 124-bp evolutionarily conserved element located in the middle part of the CpG island. No alternative splicing of the 5' end of c-myb mRNA suggested earlier (1,2) was observed. The c-myb promoter contains neither TATA nor CAAT box-like structures at the usual positions. Instead, numerous potential Sp1 factor binding sites were found both upstream and downstream from the transcription initiation sites. Moreover, consensus v-myb protein DNA-binding sites were revealed in the promoter region and in sequences downstream from it.

Publication types

  • Comparative Study

MeSH terms

  • Animals
  • Base Sequence
  • Chickens
  • Cloning, Molecular
  • Dinucleoside Phosphates / analysis*
  • Endonucleases
  • Erythrocytes / analysis
  • Male
  • Mice
  • Molecular Sequence Data
  • Organ Specificity
  • Promoter Regions, Genetic
  • Proto-Oncogene Proteins / genetics*
  • Proto-Oncogene Proteins c-myb
  • Proto-Oncogenes*
  • RNA Caps / genetics
  • Restriction Mapping
  • Sequence Homology, Nucleic Acid
  • Single-Strand Specific DNA and RNA Endonucleases
  • Thymus Gland / analysis
  • Transcription, Genetic*

Substances

  • Dinucleoside Phosphates
  • Proto-Oncogene Proteins
  • Proto-Oncogene Proteins c-myb
  • RNA Caps
  • cytidylyl-3'-5'-guanosine
  • Endonucleases
  • Single-Strand Specific DNA and RNA Endonucleases

Associated data

  • GENBANK/X14612