Coupling of T cell receptor specificity to natural killer T cell development by bivalent histone H3 methylation

J Exp Med. 2015 Mar 9;212(3):297-306. doi: 10.1084/jem.20141499. Epub 2015 Feb 16.

Abstract

The fidelity of T cell immunity depends greatly on coupling T cell receptor signaling with specific T cell effector functions. Here, we describe a chromatin-based mechanism that enables integration of TCR specificity into definite T cell lineage commitment. Using natural killer T cells (iNKT cell) as a model of a T cell subset that differentiates in response to specific TCR signaling, we identified a key role of histone H3 lysine 27 trimethylation (H3K27me3) in coupling iNKT cell TCR specificity with the generation of iNKT cells. We found that the Zbtb16/PLZF gene promoter that drives iNKT cell differentiation possesses a bivalent chromatin state characterized by the simultaneous presence of negative and positive H3K27me3 and H3K4me3 modifications. Depletion of H3K27me3 at the Zbtb16/PLZF promoter leads to uncoupling of iNKT cell development from TCR specificity and is associated with accumulation of iNKT-like CD4(+) cells that express a non-iNKT cell specific T cell repertoire. In turn, stabilization of H3K27me3 leads to a drastic reduction of the iNKT cell population. Our data suggest that H3K27me3 levels at the bivalent Zbtb16/PLZF gene define a threshold enabling precise coupling of TCR specificity to lineage commitment.

MeSH terms

  • Animals
  • CD4 Antigens / metabolism
  • CD8-Positive T-Lymphocytes / physiology
  • Chromatin / metabolism
  • Enhancer of Zeste Homolog 2 Protein
  • Histone Demethylases / genetics
  • Histone Demethylases / metabolism
  • Histones / metabolism*
  • Jumonji Domain-Containing Histone Demethylases / genetics
  • Jumonji Domain-Containing Histone Demethylases / metabolism
  • Kruppel-Like Transcription Factors / genetics
  • Kruppel-Like Transcription Factors / metabolism
  • Lysine / metabolism
  • Methylation
  • Mice, Inbred C57BL
  • Mice, Transgenic
  • Natural Killer T-Cells / immunology*
  • Natural Killer T-Cells / metabolism
  • Polycomb Repressive Complex 2 / genetics
  • Polycomb Repressive Complex 2 / metabolism
  • Promoter Regions, Genetic
  • Promyelocytic Leukemia Zinc Finger Protein
  • Receptors, Antigen, T-Cell / metabolism
  • T-Cell Antigen Receptor Specificity*

Substances

  • CD4 Antigens
  • Chromatin
  • Histones
  • Kruppel-Like Transcription Factors
  • Promyelocytic Leukemia Zinc Finger Protein
  • Receptors, Antigen, T-Cell
  • Zbtb16 protein, mouse
  • Histone Demethylases
  • Jumonji Domain-Containing Histone Demethylases
  • Utx protein, mouse
  • Kdm6b protein, mouse
  • Enhancer of Zeste Homolog 2 Protein
  • Ezh2 protein, mouse
  • Polycomb Repressive Complex 2
  • Lysine