COLD1 confers chilling tolerance in rice

Cell. 2015 Mar 12;160(6):1209-21. doi: 10.1016/j.cell.2015.01.046. Epub 2015 Feb 26.

Abstract

Rice is sensitive to cold and can be grown only in certain climate zones. Human selection of japonica rice has extended its growth zone to regions with lower temperature, while the molecular basis of this adaptation remains unknown. Here, we identify the quantitative trait locus COLD1 that confers chilling tolerance in japonica rice. Overexpression of COLD1(jap) significantly enhances chilling tolerance, whereas rice lines with deficiency or downregulation of COLD1(jap) are sensitive to cold. COLD1 encodes a regulator of G-protein signaling that localizes on plasma membrane and endoplasmic reticulum (ER). It interacts with the G-protein α subunit to activate the Ca(2+) channel for sensing low temperature and to accelerate G-protein GTPase activity. We further identify that a SNP in COLD1, SNP2, originated from Chinese Oryza rufipogon, is responsible for the ability of COLD(jap/ind) to confer chilling tolerance, supporting the importance of COLD1 in plant adaptation.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Amino Acid Sequence
  • Breeding
  • Cold Shock Proteins and Peptides / genetics
  • Cold Shock Proteins and Peptides / metabolism*
  • Cold Temperature
  • Endoplasmic Reticulum
  • GTP-Binding Proteins / chemistry
  • GTP-Binding Proteins / genetics
  • GTP-Binding Proteins / metabolism
  • Gene Expression Regulation, Plant
  • Molecular Sequence Data
  • Mutation
  • Oryza / cytology
  • Oryza / genetics
  • Oryza / physiology*
  • Plant Proteins / chemistry
  • Plant Proteins / genetics
  • Plant Proteins / metabolism*
  • Plants, Genetically Modified
  • Polymorphism, Single Nucleotide
  • Quantitative Trait Loci
  • Sequence Alignment

Substances

  • Cold Shock Proteins and Peptides
  • Plant Proteins
  • GTP-Binding Proteins