A proteomic approach to discover and compare interacting partners of papillomavirus E2 proteins from diverse phylogenetic groups

Proteomics. 2015 Jun;15(12):2038-50. doi: 10.1002/pmic.201400613. Epub 2015 Apr 28.

Abstract

Papillomaviruses are a very successful group of viruses that replicate persistently in localized regions of the stratified epithelium of their specific host. Infection results in pathologies ranging from asymptomatic infection, benign warts, to malignant carcinomas. Despite this diversity, papillomavirus genomes are small (7-8 kbp) and contain at most eight genes. To sustain the complex papillomaviral life cycle, each viral protein has multiple functions and interacts with and manipulates a plethora of cellular proteins. In this study, we use tandem affinity purification and MS to identify host factors that interact with 11 different papillomavirus E2 proteins from diverse phylogenetic groups. The E2 proteins function in viral transcription and replication and correspondingly interact with host proteins involved in transcription, chromatin remodeling and modification, replication, and RNA processing.

Keywords: BRD4; E2; HPV; Microbiology; Papillomavirus; Virus.

Publication types

  • Comparative Study
  • Research Support, N.I.H., Intramural

MeSH terms

  • Blotting, Western
  • Cells, Cultured
  • Chromatography, Liquid
  • DNA-Binding Proteins / metabolism*
  • Fibroblasts / metabolism
  • Fibroblasts / virology
  • Humans
  • Immunoprecipitation
  • Oncogene Proteins, Viral / metabolism*
  • Papillomaviridae / physiology*
  • Protein Interaction Maps*
  • Proteome / analysis*
  • Proteome / classification*
  • Proteomics / methods*
  • Tandem Mass Spectrometry
  • Viral Proteins / metabolism*

Substances

  • DNA-Binding Proteins
  • Oncogene Proteins, Viral
  • Proteome
  • Viral Proteins
  • oncogene protein E2, Human papillomavirus type 1