Hcmv-miR-UL22A-5p: A Biomarker in Transplantation With Broad Impact on Host Gene Expression and Potential Immunological Implications

Am J Transplant. 2015 Jul;15(7):1893-902. doi: 10.1111/ajt.13222. Epub 2015 Apr 1.

Abstract

Cytomegalovirus (CMV) encodes multiple microRNAs. While these have been partially characterized in vitro, their relevance to clinical CMV infection has not been evaluated. We analyzed samples from a cohort of solid organ transplant patients with CMV disease (n = 245) for viral microRNA expression. Several CMV microRNAs were readily detectable in patients with CMV disease in variable relative abundance. Expression level generally correlated with DNA viral load and the absence of viral microRNA was associated with faster viral clearance. Detection of hcmv-miR-UL22A-5p at baseline independently predicted the recurrence of CMV viremia upon discontinuation of antiviral therapy (OR 3.024, 95% CI: 1.35-6.8; p = 0.007). A combination of direct mRNA targeting by the microRNA and indirect modulation of gene expression involving isoforms of the transcriptional regulator C-MYC may be responsible for the broad effects seen in the association of gene transcripts with the RNA-induced silencing complex and in global protein expression upon hcmv-miR-UL22A-5p transfection. This novel study of in vivo viral microRNA expression profiles provides unique insight into the complexity of clinical CMV infection following transplantation. We provide evidence that viral microRNAs may have complex effects on gene expression and be associated with specific virologic and clinical outcomes, and thus could be further evaluated as biomarkers.

Keywords: infection and infectious agents; infectious disease; molecular biology: micro RNA; molecular biology: transcription factor; translational research / science; viral: Cytomegalovirus (CMV).

Publication types

  • Multicenter Study
  • Randomized Controlled Trial
  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biomarkers
  • Blotting, Western
  • Cohort Studies
  • Computational Biology
  • Cytomegalovirus / genetics*
  • Cytomegalovirus Infections / blood
  • Cytomegalovirus Infections / genetics*
  • Cytomegalovirus Infections / virology
  • Follow-Up Studies
  • Gene Expression Profiling*
  • Gene Expression Regulation, Viral*
  • Graft Rejection
  • Graft Survival
  • Host-Pathogen Interactions / genetics*
  • Host-Pathogen Interactions / immunology
  • Humans
  • Immunoprecipitation
  • MicroRNAs / blood
  • MicroRNAs / genetics*
  • Organ Transplantation*
  • Prognosis
  • RNA, Viral / blood
  • RNA, Viral / genetics
  • Real-Time Polymerase Chain Reaction
  • Recurrence
  • Risk Factors
  • Virus Replication

Substances

  • Biomarkers
  • MicroRNAs
  • RNA, Viral