Probing protein quinary interactions by in-cell nuclear magnetic resonance spectroscopy

Biochemistry. 2015 May 5;54(17):2727-38. doi: 10.1021/acs.biochem.5b00036. Epub 2015 Apr 27.

Abstract

Historically introduced by McConkey to explain the slow mutation rate of highly abundant proteins, weak protein (quinary) interactions are an emergent property of living cells. The protein complexes that result from quinary interactions are transient and thus difficult to study biochemically in vitro. Cross-correlated relaxation-induced polarization transfer-based in-cell nuclear magnetic resonance allows the characterization of protein quinary interactions with atomic resolution inside live prokaryotic and eukaryotic cells. We show that RNAs are an important component of protein quinary interactions. Protein quinary interactions are unique to the target protein and may affect physicochemical properties, protein activity, and interactions with drugs.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Base Sequence
  • DNA Probes
  • Electroporation
  • Humans
  • Magnetic Resonance Spectroscopy / methods*
  • Models, Molecular
  • Proteins / chemistry*
  • Proteins / genetics
  • RNA / chemistry
  • Transfection

Substances

  • DNA Probes
  • Proteins
  • RNA