Effect of heavy metals on acdS gene expression in Herbaspirillium sp. GW103 isolated from rhizosphere soil

J Basic Microbiol. 2015 Oct;55(10):1232-8. doi: 10.1002/jobm.201500008. Epub 2015 Apr 22.

Abstract

This study aimed to understand the influence of heavy metals on 1-aminocyclopropane-1-carboxylate deaminase activity (ACCD) and acdS gene expression in Herbaspirillium sp. GW103. The GW103 strain ACCD activity decreased in cells grown in a medium supplemented with Pb and As, whereas cells grown in medium supplemented with Cu showed increase in enzyme activity. The GW103 strain produced 262.2 ± 6.17 μmol of α-ketobutyrate per milligram of protein per hour during ACC deamination at 25 °C after 24 h incubation. Using a PCR approach, an acdS coding-gene of 1.06 kbp was amplified in isolate GW103, showing 92% identity with Herbaspirillum seropedicae SmR1 acdS gene. Real time quantitative polymerase chain reaction results indicate that the acdS expression rate was increased (7.1-fold) in the presence of Cu, whereas it decreased (0.2- and 0.1-fold) in the presence of As and Pb.

Keywords: ACCD; Heavy metals; Herbaspirillium sp; RT-qPCR.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Arsenic
  • Carbon-Carbon Lyases / genetics
  • Copper
  • DNA, Bacterial / genetics
  • Gene Expression Regulation, Bacterial*
  • Genes, Bacterial*
  • Herbaspirillum / enzymology*
  • Herbaspirillum / genetics*
  • Herbaspirillum / isolation & purification
  • Lead
  • Metals, Heavy / metabolism*
  • Plant Roots
  • Real-Time Polymerase Chain Reaction
  • Rhizosphere
  • Sequence Analysis, DNA
  • Soil Microbiology*

Substances

  • DNA, Bacterial
  • Metals, Heavy
  • Lead
  • Copper
  • 1-aminocyclopropane-1-carboxylate deaminase
  • Carbon-Carbon Lyases
  • Arsenic