A panel of novel biomarkers representing different disease pathways improves prediction of renal function decline in type 2 diabetes

PLoS One. 2015 May 14;10(5):e0120995. doi: 10.1371/journal.pone.0120995. eCollection 2015.

Abstract

Objective: We aimed to identify a novel panel of biomarkers predicting renal function decline in type 2 diabetes, using biomarkers representing different disease pathways speculated to contribute to the progression of diabetic nephropathy.

Research design and methods: A systematic data integration approach was used to select biomarkers representing different disease pathways. Twenty-eight biomarkers were measured in 82 patients seen at an outpatient diabetes center in The Netherlands. Median follow-up was 4.0 years. We compared the cross-validated explained variation (R2) of two models to predict eGFR decline, one including only established risk markers, the other adding a novel panel of biomarkers. Least absolute shrinkage and selection operator (LASSO) was used for model estimation. The C-index was calculated to assess improvement in prediction of accelerated eGFR decline defined as <-3.0 mL/min/1.73m2/year.

Results: Patients' average age was 63.5 years and baseline eGFR was 77.9 mL/min/1.73m2. The average rate of eGFR decline was -2.0 ± 4.7 mL/min/1.73m2/year. When modeled on top of established risk markers, the biomarker panel including matrix metallopeptidases, tyrosine kinase, podocin, CTGF, TNF-receptor-1, sclerostin, CCL2, YKL-40, and NT-proCNP improved the explained variability of eGFR decline (R2 increase from 37.7% to 54.6%; p=0.018) and improved prediction of accelerated eGFR decline (C-index increase from 0.835 to 0.896; p=0.008).

Conclusions: A novel panel of biomarkers representing different pathways of renal disease progression including inflammation, fibrosis, angiogenesis, and endothelial function improved prediction of eGFR decline on top of established risk markers in type 2 diabetes. These results need to be confirmed in a large prospective cohort.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adaptor Proteins, Signal Transducing
  • Adipokines / blood
  • Adult
  • Aged
  • Biomarkers / blood
  • Bone Morphogenetic Proteins / blood
  • Chemokine CCL2 / blood
  • Chitinase-3-Like Protein 1
  • Connective Tissue Growth Factor / blood
  • Diabetes Mellitus, Type 2 / blood*
  • Diabetes Mellitus, Type 2 / diagnosis
  • Diabetes Mellitus, Type 2 / physiopathology
  • Diabetic Nephropathies / blood*
  • Diabetic Nephropathies / diagnosis
  • Diabetic Nephropathies / physiopathology
  • Disease Progression
  • Female
  • Fibrosis
  • Genetic Markers
  • Glomerular Filtration Rate
  • Humans
  • Intracellular Signaling Peptides and Proteins / blood
  • Kidney / metabolism*
  • Kidney / physiopathology
  • Lectins / blood
  • Male
  • Matrix Metalloproteinases, Secreted / blood
  • Membrane Proteins / blood
  • Middle Aged
  • Natriuretic Peptide, C-Type / blood
  • Outpatients
  • Prognosis
  • Prospective Studies
  • Protein-Tyrosine Kinases / blood
  • Receptors, Tumor Necrosis Factor, Type I / blood
  • Renal Insufficiency, Chronic / blood*
  • Renal Insufficiency, Chronic / diagnosis
  • Renal Insufficiency, Chronic / physiopathology
  • Risk Factors

Substances

  • Adaptor Proteins, Signal Transducing
  • Adipokines
  • Biomarkers
  • Bone Morphogenetic Proteins
  • CCL2 protein, human
  • CCN2 protein, human
  • CHI3L1 protein, human
  • Chemokine CCL2
  • Chitinase-3-Like Protein 1
  • Genetic Markers
  • Intracellular Signaling Peptides and Proteins
  • Lectins
  • Membrane Proteins
  • NPHS2 protein
  • Receptors, Tumor Necrosis Factor, Type I
  • SOST protein, human
  • amino-terminal pro-C-type natriuretic peptide, human
  • Natriuretic Peptide, C-Type
  • Connective Tissue Growth Factor
  • Protein-Tyrosine Kinases
  • Matrix Metalloproteinases, Secreted

Grants and funding

The work leading to this paper received funding from the European Community’s Seventh Framework Programme under grant agreement no. HEALTH–F2–2009–241544 (SysKID consortium). The PREDICTIONS Study was supported by the Commission of the European Communities, 6th Framework Programme Priority 1, Life Sciences, Genomics and Biotechnology under grant agreement no. Health LSHM-CT-2005-018733. HJLH is supported by a VENI grant from the Netherlands Organisation for Scientific Research. The funders had no role in study design, data collection and analysis, decision to publish, or preparation of the manuscript.