Unravelling the one-carbon metabolism of the acetogen Sporomusa strain An4 by genome and proteome analysis

Environ Microbiol. 2016 Sep;18(9):2843-55. doi: 10.1111/1462-2920.12973. Epub 2015 Aug 11.

Abstract

The Sporomusa genus comprises anaerobic spore-forming acetogenic bacteria that stain Gram-negative. Sporomusa species typically grow with one-carbon substrates and N-methylated compounds. In the degradation of these compounds methyltransferases are involved. In addition, Sporomusa species can grow autotrophically with H2 and CO2 , and use a variety of sugars for acetogenic growth. Here we describe a genome analysis of Sporomusa strain An4 and a proteome analysis of cells grown under five different conditions. Comparison of the genomes of Sporomusa strain An4 and Sporomusa ovata strain H1 indicated that An4 is a S. ovata strain. Proteome analysis showed a high abundance of several methyltransferases, predominantly trimethylamine methyltransferases, during growth with betaine, whereas trimethylamine is one of the main end-products of betaine degradation. In methanol degradation methyltransferases are also involved. In methanol-utilizing methanogens, two methyltransferases catalyse methanol conversion, methyltransferase 1 composed of subunits MtaB and MtaC and methyltransferase 2, also called MtaA. The two methyltransferase 1 subunits MtaB and MtaC were highly abundant when strain An4 was grown with methanol. However, instead of MtaA a methyltetrahydrofolate methyltransferase was synthesized. We propose a novel methanol degradation pathway in Sporomusa strain An4 that uses a methyltetrahydrofolate methyltransferase instead of MtaA.

MeSH terms

  • Betaine / metabolism
  • Carbon / metabolism
  • Genome, Bacterial
  • Methanol / metabolism
  • Methylamines / metabolism
  • Methyltransferases / metabolism
  • Proteome*
  • Veillonellaceae / enzymology
  • Veillonellaceae / genetics
  • Veillonellaceae / metabolism*

Substances

  • Methylamines
  • Proteome
  • Betaine
  • Carbon
  • Methyltransferases
  • trimethylamine
  • Methanol