Identification of cancer-related genes and motifs in the human gene regulatory network

IET Syst Biol. 2015 Aug;9(4):128-34. doi: 10.1049/iet-syb.2014.0058.

Abstract

The authors investigated the regulatory network motifs and corresponding motif positions of cancer-related genes. First, they mapped disease-related genes to a transcription factor regulatory network. Next, they calculated statistically significant motifs and subsequently identified positions within these motifs that were enriched in cancer-related genes. Potential mechanisms of these motifs and positions are discussed. These results could be used to identify other disease- and cancer-related genes and could also suggest mechanisms for how these genes relate to co-occurring diseases.

MeSH terms

  • Base Sequence
  • Chromosome Mapping / methods*
  • Gene Expression Regulation, Neoplastic / genetics
  • Genes, Neoplasm / genetics*
  • Genetic Predisposition to Disease / genetics*
  • Humans
  • Molecular Sequence Data
  • Multigene Family / genetics*
  • Neoplasms / genetics*
  • Nucleotide Motifs
  • Transcription Factors / genetics*

Substances

  • Transcription Factors