(19)F Paramagnetic Relaxation Enhancement: A Valuable Tool for Distance Measurements in Proteins

Angew Chem Int Ed Engl. 2016 Jan 4;55(1):150-4. doi: 10.1002/anie.201508464. Epub 2015 Oct 29.

Abstract

Fluorine NMR paramagnetic relaxation enhancement was evaluated as a versatile approach for extracting distance information in selectively F-labeled proteins. Proof of concept and initial applications are presented for the HIV-inactivating lectin cyanovirin-N. Single F atoms were introduced at the 4-, 5-, 6- or 7 positions of Trp49 and the 4-position of Phe4, Phe54, and Phe80. The paramagnetic nitroxide spin label was attached to Cys residues that were placed into the protein at positions 50 or 52. (19)F-T2 NMR spectra with different relaxation delays were recorded and the transverse (19)F-PRE rate, (19)F-Γ2 , was used to determine the average distance between the F nucleus and the paramagnetic center. Our data show that experimental (19)F PRE-based distances correspond to 0.93 of the (1)HN-PRE distances, in perfect agreement with the gyromagnetic γ(19)F/γ(1)H ratio, thereby demonstrating that (19)F PREs are excellent alternative parameters for quantitative distance measurements in selectively F-labeled proteins.

Keywords: NMR spectroscopy; distances; fluorine; paramagnetic relaxation enhancements; proteins.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Fluorine
  • Nuclear Magnetic Resonance, Biomolecular*
  • Proteins / chemistry*

Substances

  • Proteins
  • Fluorine