The differentially methylated region of MEG8 is hypermethylated in patients with Temple syndrome

Epigenomics. 2015 Oct;7(7):1089-97. doi: 10.2217/epi.15.73. Epub 2015 Nov 6.

Abstract

Aim: To investigate the DNA-methylation levels in the newly described MEG8 differentially methylated region (DMR) in the imprinted cluster in 14q32 in patients with Temple syndrome.

Patients & methods: We included three patients with Temple syndrome which were studied by Infinium HumanMethylation450 BeadChips, locus-specific bisulfite-pyrosequencing, methylation-specific-MLPA and microsatellite analyses. The tag-CpG of the MEG8-DMR was investigated using the Infinium HumanMethylation450 BeadChip.

Results: In all three patients, the identical pattern of DNA-hypermethylation of the MEG8-DMR was observed along with DNA-hypomethylation of the IG-DMR and MEG3-DMR.

Conclusion: Based on the observed MEG8-DMR DNA-hypermethylation and previously published data, we conclude that DNA-methylation of the MEG3- and MEG8-DMR is functionally dependent on the DNA-methylation pattern of the IG-DMR. The observed combination of epimutations is predicted to be associated with bi-allelic MEG3 and MEG8 expression in individuals with Temple syndrome.

Keywords: DNA methylation; IG-DMR; MEG3; MEG3-DMR; MEG8; MEG8-DMR; Temple syndrome; imprinting.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Adolescent
  • Child
  • Child, Preschool
  • Chromosomes, Human, Pair 14*
  • CpG Islands
  • DNA Methylation
  • Developmental Disabilities / genetics*
  • Developmental Disabilities / pathology
  • Epigenesis, Genetic*
  • Female
  • Genomic Imprinting
  • High-Throughput Nucleotide Sequencing
  • Humans
  • Male
  • Microsatellite Repeats
  • Polymerase Chain Reaction
  • RNA Isoforms / genetics*
  • RNA, Long Noncoding / genetics*
  • Uniparental Disomy / genetics*
  • Uniparental Disomy / pathology

Substances

  • MEG3 non-coding RNA, human
  • RNA Isoforms
  • RNA, Long Noncoding