β-Subunit Binding Is Sufficient for Ligands to Open the Integrin αIIbβ3 Headpiece

J Biol Chem. 2016 Feb 26;291(9):4537-46. doi: 10.1074/jbc.M115.705624. Epub 2015 Dec 2.

Abstract

The platelet integrin αIIbβ3 binds to a KQAGDV motif at the fibrinogen γ-chain C terminus and to RGD motifs present in loops in many extracellular matrix proteins. These ligands bind in a groove between the integrin α and β-subunits; the basic Lys or Arg side chain hydrogen bonds to the αIIb-subunit, and the acidic Asp side chain coordinates to a metal ion held by the β3-subunit. Ligand binding induces headpiece opening, with conformational change in the β-subunit. During this opening, RGD slides in the ligand-binding pocket toward αIIb, with movement of the βI-domain β1-α1 loop toward αIIb, enabling formation of direct, charged hydrogen bonds between the Arg side chain and αIIb. Here we test whether ligand interactions with β3 suffice for stable ligand binding and headpiece opening. We find that the AGDV tetrapeptide from KQAGDV binds to the αIIbβ3 headpiece with affinity comparable with the RGDSP peptide from fibronectin. AGDV induced complete headpiece opening in solution as shown by increase in hydrodynamic radius. Soaking of AGDV into closed αIIbβ3 headpiece crystals induced intermediate states similarly to RGDSP. AGDV has very little contact with the α-subunit. Furthermore, as measured by epitope exposure, AGDV, like the fibrinogen γ C-terminal peptide and RGD, caused integrin extension on the cell surface. Thus, pushing by the β3-subunit on Asp is sufficient for headpiece opening and ligand sliding, and no pulling by the αIIb subunit on Arg is required.

Keywords: allostery; conformation; fibrinogen; hemostasis; integrin; platelet; receptor; structure.

Publication types

  • Research Support, N.I.H., Extramural
  • Research Support, U.S. Gov't, Non-P.H.S.

MeSH terms

  • Animals
  • Binding Sites
  • Binding, Competitive
  • CHO Cells
  • Cricetulus
  • Crystallography, X-Ray
  • Fluorescence Polarization
  • Hydrogen Bonding
  • Integrin alpha2 / chemistry
  • Integrin alpha2 / genetics
  • Integrin alpha2 / metabolism*
  • Integrin beta3 / chemistry
  • Integrin beta3 / genetics
  • Integrin beta3 / metabolism*
  • Kinetics
  • Ligands
  • Microscopy, Electron, Transmission
  • Models, Molecular*
  • Nephelometry and Turbidimetry
  • Oligopeptides / chemistry
  • Oligopeptides / metabolism*
  • Particle Size
  • Platelet Glycoprotein GPIIb-IIIa Complex / chemistry
  • Platelet Glycoprotein GPIIb-IIIa Complex / genetics
  • Platelet Glycoprotein GPIIb-IIIa Complex / metabolism*
  • Platelet Glycoprotein GPIIb-IIIa Complex / ultrastructure
  • Protein Conformation
  • Protein Interaction Domains and Motifs
  • Recombinant Proteins / chemistry
  • Recombinant Proteins / metabolism

Substances

  • ITGA2B protein, human
  • ITGB3 protein, human
  • Integrin alpha2
  • Integrin beta3
  • Ligands
  • Oligopeptides
  • Platelet Glycoprotein GPIIb-IIIa Complex
  • Recombinant Proteins
  • alanyl-glycyl-aspartyl-valine
  • arginyl-glycyl-aspartyl-phenylalanine

Associated data

  • PDB/4Z7N
  • PDB/4Z7O
  • PDB/4Z7Q
  • PDB/5HDB