Incorporating Informatics for Integrating Biology and the Bedside (i2b2) into Predoctoral Trainee Curriculum to Evaluate Student-Generated Hypotheses

Clin Transl Sci. 2015 Dec;8(6):729-33. doi: 10.1111/cts.12357. Epub 2015 Dec 14.

Abstract

As part of the Clinical and Translational Science Institute predoctoral TL1 training program at the Pennsylvania State University, a multidisciplinary team of predoctoral trainees representing the Chemistry, Neurosurgery, Nutritional Sciences, and Public Health Sciences departments were introduced to the NIH-sponsored Informatics for Integrating Biology and the Bedside (i2b2) database to test the following student-generated hypothesis: children with iron deficiency anemia (IDA) are at increased risk of attention deficit-hyperactivity disorder (ADHD). Children aged 4-12 and 4-17 years were categorized into IDA and control groups. De-identified medical records from the Penn State Milton S. Hershey Medical Center (HMC) and the Virginia Commonwealth University Medical Center (VCUMC) were used for the analysis. Overall, ADHD prevalence at each institution was lower than 2011 state estimates. There was a significant association between IDA and ADHD in the 4-17-year-old age group for all children (OR: 1.902 [95% CI: 1.363-2.656]), Caucasian children (OR: 1.802 [95% CI: 1.133-2.864]), and African American children (OR: 1.865 [95% CI: 1.152-3.021]). Clinical and Translational Science Award (CTSA) infrastructure is particularly useful for trainees to answer de novo scientific questions with minimal additional training and technical expertise. Moreover, projects can be expanded by collaborating within the CTSA network.

Keywords: anemia-nutritional; attention-deficit/hyperactivity disorder; bioinformatics; cobalamin; folate < anemia; iron; medical records; predoctoral.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Adolescent
  • Anemia, Iron-Deficiency / complications*
  • Attention Deficit Disorder with Hyperactivity / complications*
  • Child
  • Child, Preschool
  • Curriculum*
  • Electronic Health Records
  • Female
  • Humans
  • Male
  • Medical Informatics / methods
  • National Institutes of Health (U.S.)
  • Pennsylvania
  • Prevalence
  • Research Design
  • SEER Program
  • Students, Medical
  • Translational Research, Biomedical / education*
  • Translational Research, Biomedical / methods*
  • United States
  • Virginia