A betabaculovirus encoding a gp64 homolog

BMC Genomics. 2016 Feb 4:17:94. doi: 10.1186/s12864-016-2408-9.

Abstract

Background: A betabaculovirus (DisaGV) was isolated from Diatraea saccharalis (Lepidoptera: Crambidae), one of the most important insect pests of the sugarcane and other monocot cultures in Brazil.

Results: The complete genome sequence of DisaGV was determined using the 454-pyrosequencing method. The genome was 98,392 bp long, which makes it the smallest lepidopteran-infecting baculovirus sequenced to date. It had a G + C content of 29.7% encoding 125 putative open reading frames (ORF). All the 37 baculovirus core genes and a set of 19 betabaculovirus-specific genes were found. A group of 13 putative genes was not found in any other baculovirus genome sequenced so far. A phylogenetic analysis indicated that DisaGV is a member of Betabaculovirus genus and that it is a sister group to a cluster formed by ChocGV, ErelGV, PiraGV isolates, ClanGV, CaLGV, CpGV, CrleGV, AdorGV, PhopGV and EpapGV. Surprisingly, we found in the DisaGV genome a G protein-coupled receptor related to lepidopteran and other insect virus genes and a gp64 homolog, which is likely a product of horizontal gene transfer from Group 1 alphabaculoviruses.

Conclusion: DisaGV represents a distinct lineage of the genus Betabaculovirus. It is closely related to the CpGV-related group and presents the smallest genome in size so far. Remarkably, we found a homolog of gp64, which was reported solely in group 1 alphabaculovirus genomes so far.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Baculoviridae / classification
  • Baculoviridae / genetics*
  • Baculoviridae / isolation & purification
  • Baculoviridae / ultrastructure
  • Base Composition
  • Base Sequence
  • Brazil
  • Gene Order
  • Genome, Viral
  • Genomics
  • Molecular Sequence Data
  • Open Reading Frames
  • Phylogeny
  • Saccharum / virology
  • Viral Envelope Proteins / chemistry
  • Viral Envelope Proteins / genetics*
  • Viral Proteins / genetics

Substances

  • Viral Envelope Proteins
  • Viral Proteins