Alternative Splicing of Neuronal Differentiation Factor TRF2 Regulated by HNRNPH1/H2

Cell Rep. 2016 May 3;15(5):926-934. doi: 10.1016/j.celrep.2016.03.080. Epub 2016 Apr 21.

Abstract

During neuronal differentiation, use of an alternative splice site on the rat telomere repeat-binding factor 2 (TRF2) mRNA generates a short TRF2 protein isoform (TRF2-S) capable of derepressing neuronal genes. However, the RNA-binding proteins (RBPs) controlling this splicing event are unknown. Here, using affinity pull-down analysis, we identified heterogeneous nuclear ribonucleoproteins H1 and H2(HNRNPH) as RBPs specifically capable of interacting with the spliced RNA segment (exon 7) of Trf2 pre-mRNA. HNRNPH proteins prevent the production of the short isoform of Trf2 mRNA, as HNRNPH silencing selectively elevates TRF2-S levels. Accordingly, HNRNPH levels decline while TRF2-S levels increase during neuronal differentiation. In addition, CRISPR/Cas9-mediated deletion of hnRNPH2 selectively accelerates the NGF-triggered differentiation of rat pheochromocytoma cells into neurons. In sum, HNRNPH is a splicing regulator of Trf2 pre-mRNA that prevents the expression of TRF2-S, a factor implicated in neuronal differentiation.

Keywords: HNRNPH; TRF2; TRF2-S; alternative splicing; mRNA; ribonucleoprotein complex.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Alternative Splicing / genetics*
  • Animals
  • Base Sequence
  • Cell Differentiation / genetics*
  • Exons / genetics
  • Heterogeneous-Nuclear Ribonucleoprotein Group F-H / metabolism*
  • Neurons / cytology*
  • Neurons / metabolism
  • PC12 Cells
  • Protein Binding
  • Proteomics
  • RNA / metabolism
  • RNA Precursors / genetics
  • Rats
  • Telomeric Repeat Binding Protein 2 / genetics
  • Telomeric Repeat Binding Protein 2 / metabolism*

Substances

  • Heterogeneous-Nuclear Ribonucleoprotein Group F-H
  • RNA Precursors
  • Telomeric Repeat Binding Protein 2
  • RNA