A Buffered Alcohol-Based Fixative for Histomorphologic and Molecular Applications

J Histochem Cytochem. 2016 Jul;64(7):425-40. doi: 10.1369/0022155416649579. Epub 2016 May 24.

Abstract

Formalin-fixed paraffin-embedded (FFPE) tissue is the predominant preparation for diagnostic histopathological evaluation and increasingly the biospecimen on which molecular diagnostics are performed. However, formalin is carcinogenic and results in cross-linking of proteins and nicking and alterations of nucleic acids. Alternative fixatives, including 70% ethanol, improved biomolecular integrity; however, they have yet to replace neutral-buffered formalin (NBF). Herein, we describe the phosphate-buffered ethanol 70% (BE70) fixative. The histomorphology of BE70-fixed tissue is very similar to that of NBF; however, it is a non-cross-linking fixative and lacks the carcinogenic profile of formaldehyde-based fixatives. RNA isolated from tissue fixed in BE70 was of substantially higher quality and quantity than that was recovered from formalin-fixed tissue. Furthermore, the BE70 fixative showed excellent RNA and DNA integrity compared with that of NBF fixative based on real-time polymerase chain reaction analysis results. Immunohistochemical staining was similar for the antigen tested. In conclusion, BE70 is a non-cross-linking fixative that is superior to NBF and 70% ethanol with reference to biomolecule recovery and quality from paraffin-embedded tissue. Additional studies to compare the histomorphologic and immunohistochemical performance and utility in a clinical setting are required.

Keywords: RNA integrity; alcohol; fixation; formalin; histomorphology; paraffin embedded; real-time RT-PCR; tissue.

Publication types

  • Research Support, N.I.H., Intramural

MeSH terms

  • Animals
  • Buffers
  • DNA / analysis
  • Ethanol*
  • Fixatives*
  • Histological Techniques
  • Kidney / chemistry
  • Kidney / cytology
  • Mice
  • Phosphates*
  • Proteins / analysis
  • RNA / analysis
  • Tissue Fixation / methods

Substances

  • Buffers
  • Fixatives
  • Phosphates
  • Proteins
  • Ethanol
  • RNA
  • DNA