Affinity and dose of TCR engagement yield proportional enhancer and gene activity in CD4+ T cells

Elife. 2016 Jul 4:5:e10134. doi: 10.7554/eLife.10134.

Abstract

Affinity and dose of T cell receptor (TCR) interaction with antigens govern the magnitude of CD4+ T cell responses, but questions remain regarding the quantitative translation of TCR engagement into downstream signals. We find that while the response of mouse CD4+ T cells to antigenic stimulation is bimodal, activated cells exhibit analog responses proportional to signal strength. Gene expression output reflects TCR signal strength, providing a signature of T cell activation. Expression changes rely on a pre-established enhancer landscape and quantitative acetylation at AP-1 binding sites. Finally, we show that graded expression of activation genes depends on ERK pathway activation, suggesting that an ERK-AP-1 axis plays an important role in translating TCR signal strength into proportional activation of enhancers and genes essential for T cell function.

Keywords: computational biology; enhancers; immunology; mouse; protein kinase; systems biology; transcription factors.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Extramural

MeSH terms

  • Animals
  • Antigens / metabolism*
  • CD4-Positive T-Lymphocytes / drug effects*
  • CD4-Positive T-Lymphocytes / immunology*
  • Gene Expression*
  • Lymphocyte Activation
  • Mice
  • Receptors, Antigen, T-Cell / metabolism*
  • Signal Transduction

Substances

  • Antigens
  • Receptors, Antigen, T-Cell