Structure and Glycan Binding of a New Cyanovirin-N Homolog

J Biol Chem. 2016 Sep 2;291(36):18967-76. doi: 10.1074/jbc.M116.740415. Epub 2016 Jul 7.

Abstract

The HIV-1 envelope glycoprotein gp120 is heavily glycosylated and bears numerous high mannose sugars. These sugars can serve as targets for HIV-inactivating compounds, such as antibodies and lectins, which bind to the glycans and interfere with viral entry into the target cell. We determined the 1.6 Å x-ray structure of Cyt-CVNH, a recently identified lectin from the cyanobacterium Cyanothece(7424), and elucidated its glycan specificity by NMR. The Cyt-CVNH structure and glycan recognition profile are similar to those of other CVNH proteins, with each domain specifically binding to Manα(1-2)Manα units on the D1 and D3 arms of high mannose glycans. However, in contrast to CV-N, no cross-linking and precipitation of the cross-linked species in solution was observed upon Man-9 binding, allowing, for the first time, investigation of the interaction of Man-9 with a member of the CVNH family by NMR. HIV assays showed that Cyt-CVNH is able to inhibit HIV-1 with ∼4-fold higher potency than CV-N(P51G), a stabilized version of wild type CV-N. Therefore, Cyt-CVNH may qualify as a valuable lectin for potential microbicidal use.

Keywords: X-ray crystallography; antiviral agent; human immunodeficiency virus (HIV); lectin; nuclear magnetic resonance (NMR); oligosaccharide.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacterial Proteins / chemistry*
  • Carrier Proteins / chemistry*
  • Cell Line
  • Crystallography, X-Ray
  • Cyanothece / chemistry*
  • HIV Envelope Protein gp120 / metabolism
  • HIV Infections / drug therapy
  • HIV Infections / metabolism
  • HIV-1 / metabolism
  • Humans
  • Male
  • Mannose / chemistry*
  • Mannose / metabolism
  • Mannose-Binding Lectins / chemistry*
  • Mannose-Binding Lectins / pharmacology
  • Protein Binding
  • Structural Homology, Protein

Substances

  • Bacterial Proteins
  • Carrier Proteins
  • HIV Envelope Protein gp120
  • Mannose-Binding Lectins
  • gp120 protein, Human immunodeficiency virus 1
  • cyanovirin N
  • Mannose

Associated data

  • PDB/2BF1
  • PDB/2EZM
  • PDB/3EZM
  • PDB/3JWD
  • PDB/4CNO
  • PDB/4NCO
  • PDB/5K79