Signal-Dependent Recruitment of BRD4 to Cardiomyocyte Super-Enhancers Is Suppressed by a MicroRNA

Cell Rep. 2016 Aug 2;16(5):1366-1378. doi: 10.1016/j.celrep.2016.06.074. Epub 2016 Jul 14.

Abstract

BRD4 governs pathological cardiac gene expression by binding acetylated chromatin, resulting in enhanced RNA polymerase II (Pol II) phosphorylation and transcription elongation. Here, we describe a signal-dependent mechanism for the regulation of BRD4 in cardiomyocytes. BRD4 expression is suppressed by microRNA-9 (miR-9), which targets the 3' UTR of the Brd4 transcript. In response to stress stimuli, miR-9 is downregulated, leading to derepression of BRD4 and enrichment of BRD4 at long-range super-enhancers (SEs) associated with pathological cardiac genes. A miR-9 mimic represses stimulus-dependent targeting of BRD4 to SEs and blunts Pol II phosphorylation at proximal transcription start sites, without affecting BRD4 binding to SEs that control constitutively expressed cardiac genes. These findings suggest that dynamic enrichment of BRD4 at SEs genome-wide serves a crucial role in the control of stress-induced cardiac gene expression and define a miR-dependent signaling mechanism for the regulation of chromatin state and Pol II phosphorylation.

MeSH terms

  • 3' Untranslated Regions / genetics
  • Acetylation
  • Animals
  • Cell Cycle Proteins
  • Chromatin / metabolism
  • Down-Regulation / physiology
  • Humans
  • Mice
  • MicroRNAs / genetics*
  • Myocytes, Cardiac / metabolism*
  • Nuclear Proteins / metabolism*
  • Phosphorylation / physiology
  • RNA Polymerase II / metabolism
  • Rats
  • Signal Transduction / physiology
  • Transcription Elongation, Genetic / physiology
  • Transcription Factors / metabolism*
  • Transcription Initiation Site / physiology

Substances

  • 3' Untranslated Regions
  • BRD4 protein, human
  • Cell Cycle Proteins
  • Chromatin
  • MIRN92 microRNA, human
  • MicroRNAs
  • Nuclear Proteins
  • Transcription Factors
  • RNA Polymerase II