Food Source Prediction of Shiga Toxin-Producing Escherichia coli Outbreaks Using Demographic and Outbreak Characteristics, United States, 1998-2014

Foodborne Pathog Dis. 2016 Oct;13(10):527-534. doi: 10.1089/fpd.2016.2140. Epub 2016 Aug 15.

Abstract

Background: Foodborne illness is a continuing public health problem in the United States. Although outbreak-associated illnesses represent a fraction of all foodborne illnesses, foodborne outbreak investigations provide critical information on the pathogens, foods, and food-pathogen pairs causing illness. Therefore, identification of a food source in an outbreak investigation is key to impacting food safety.

Objective: The objective of this study was to systematically identify outbreak-associated case demographic and outbreak characteristics that are predictive of food sources using Shiga toxin-producing Escherichia coli (STEC) outbreaks reported to Centers for Disease Control and Prevention (CDC) from 1998 to 2014 with a single ingredient identified.

Materials and methods: Differences between STEC food sources by all candidate predictors were assessed univariately. Multinomial logistic regression was used to build a prediction model, which was internally validated using a split-sample approach.

Results: There were 206 single-ingredient STEC outbreaks reported to CDC, including 125 (61%) beef outbreaks, 30 (14%) dairy outbreaks, and 51 (25%) vegetable outbreaks. The model differentiated food sources, with an overall sensitivity of 80% in the derivation set and 61% in the validation set.

Conclusions: This study demonstrates the feasibility for a tool for public health professionals to rule out food sources during hypothesis generation in foodborne outbreak investigation and to improve efficiency while complementing existing methods.

Keywords: E. Coli pathogens and food safety; Escherichia coli O157:H7; foodborne disease; foodborne outbreaks.

Publication types

  • Historical Article
  • Validation Study

MeSH terms

  • Animals
  • Centers for Disease Control and Prevention, U.S.
  • Dairy Products / adverse effects
  • Dairy Products / microbiology
  • Disease Outbreaks / history*
  • Escherichia coli Infections / epidemiology
  • Escherichia coli Infections / history
  • Escherichia coli Infections / microbiology*
  • Escherichia coli O157 / growth & development
  • Female
  • Food Contamination*
  • Foodborne Diseases / epidemiology
  • Foodborne Diseases / history
  • Foodborne Diseases / microbiology*
  • Gastroenteritis / epidemiology
  • Gastroenteritis / history
  • Gastroenteritis / microbiology*
  • History, 20th Century
  • History, 21st Century
  • Humans
  • Male
  • Meat / adverse effects
  • Meat / microbiology
  • Models, Biological*
  • Plant Leaves / adverse effects
  • Plant Leaves / microbiology
  • Registries
  • Seasons
  • Shiga-Toxigenic Escherichia coli / growth & development*
  • United States / epidemiology
  • Vegetables / adverse effects
  • Vegetables / microbiology