Proteins differentially expressed during limonene biotransformation by Penicillium digitatum DSM 62840 were examined using iTRAQ labeling coupled with 2D-LC-MS/MS

J Ind Microbiol Biotechnol. 2016 Oct;43(10):1481-95. doi: 10.1007/s10295-016-1826-7. Epub 2016 Aug 18.

Abstract

This study focused on the differences in protein expression at various periods during limonene biotransformation by Penicillium digitatum DSM 62840. A total of 3644 protein-species were quantified by iTRAQ during limonene biotransformation (0 and 12 h). A total of 643 proteins were differentially expressed, 316 proteins were significantly up-regulated and 327 proteins were markedly down-regulated. GO, COG, and pathway enrichment analysis showed that the differentially expressed proteins possessed catalytic and binding functions and were involved in a variety of cellular and metabolic process. Furthermore, the enzymes involved in limonene transformation might be related to cytochrome P-450. This study provided a powerful platform for further exploration of biotransformation, and the identified proteins provided insight into the mechanism of limonene transformation.

Keywords: Biotransformation; Penicillium digitatum DSM 62840; Proteomics; Terpene; iTRAQ.

MeSH terms

  • Biotransformation
  • Chromatography, Liquid
  • Cyclohexenes / chemistry
  • Cyclohexenes / metabolism*
  • Fungal Proteins / metabolism*
  • Limonene
  • Penicillium / metabolism*
  • Proteomics
  • Tandem Mass Spectrometry
  • Terpenes / chemistry
  • Terpenes / metabolism*

Substances

  • Cyclohexenes
  • Fungal Proteins
  • Terpenes
  • Limonene