A 6-amino acid insertion/deletion polymorphism in the mucin domain of TIM-1 confers protections against HIV-1 infection

Microbes Infect. 2017 Jan;19(1):69-74. doi: 10.1016/j.micinf.2016.09.005. Epub 2016 Sep 18.

Abstract

We investigated whether a 6-amino acid insertion/deletion polymorphism in the mucin domain of TIM-1 (T-cell immunoglobulin and mucin domain 1), modulates susceptibility to HIV-1 infection. The polymorphism was genotyped in three case/control cohorts of HIV-1 exposed seronegative individuals (HESN) and HIV-1 infected subjects from Italy, Peru, and Colombia; data from a Thai population were retrieved from the literature. Across all cohorts, homozygosity for the short TIM-1 allele was more common in HESNs than in HIV-1 infected subjects. A meta-analysis of the four association analyses yielded a p value of 0.005. In vitro infection assays of CD4+ T lymphocytes indicated that homozygosity for the short allele is associated with lower rate of HIV-1 replication. These results suggest that the deletion allele protects from HIV-1 infection with a recessive effect.

Keywords: HESN; HIV; Polymorphism; Resistance to infection; TIM-1.

MeSH terms

  • Adult
  • Amino Acids / genetics*
  • Case-Control Studies
  • Cells, Cultured
  • Cohort Studies
  • Colombia
  • Disease Resistance*
  • Female
  • Gene Frequency
  • HIV Infections / immunology*
  • HIV-1 / immunology*
  • HIV-1 / physiology
  • Hepatitis A Virus Cellular Receptor 1 / genetics*
  • Humans
  • Italy
  • Male
  • Middle Aged
  • Mutagenesis, Insertional
  • Peru
  • Polymorphism, Genetic*
  • Sequence Deletion
  • Thailand
  • Virus Replication
  • Young Adult

Substances

  • Amino Acids
  • HAVCR1 protein, human
  • Hepatitis A Virus Cellular Receptor 1