Sound of silence: the beauvericin cluster in Fusarium fujikuroi is controlled by cluster-specific and global regulators mediated by H3K27 modification

Environ Microbiol. 2016 Nov;18(11):4282-4302. doi: 10.1111/1462-2920.13576.

Abstract

In this study, we compared the secondary metabolite profile of Fusarium fujikuroi and the histone deacetylase mutant ΔHDA1. We identified a novel peak in ΔHDA1, which was identified as beauvericin (BEA). Going in line with a 1000-fold increased BEA production, the respective non-ribosomal peptide synthetase (NRPS)-encoding gene (BEA1), as well as two adjacent genes (BEA2-BEA3), were significantly up-regulated in ΔHDA1 compared to the wild type. A special role was revealed for the ABC transporter Bea3: deletion of the encoding gene resulted in significant up-regulation of BEA1 and BEA2 and drastically elevated product yields. Furthermore, mutation of a conserved sequence motif in the promoter of BEA1 released BEA repression and resulted in elevated product levels. Candidate transcription factors (TFs) that could bind to this motif are the cluster-specific TF Bea4 as well as a homolog of the global mammalian Kruppel-like TF Yin Yang 1 (Yy1), both acting as repressors of BEA biosynthesis. In addition to Hda1, BEA biosynthesis is repressed by the activity of the H3K27 methyltransferase Kmt6. Consistently, Western blot analyses revealed a genome-wide enrichment of H3K27 acetylation (H3K27ac) in the ΔHDA1 and KMT6 knock-down mutants. Subsequent chromatin immunoprecipitation (ChIP) experiments showed elevated H3K27ac modification levels at the BEA cluster.

MeSH terms

  • Acetylation
  • Depsipeptides / biosynthesis*
  • Fungal Proteins / genetics
  • Fungal Proteins / metabolism*
  • Fusarium / enzymology
  • Fusarium / genetics
  • Fusarium / metabolism*
  • Gene Expression Regulation, Fungal*
  • Histone Deacetylases / genetics
  • Histone Deacetylases / metabolism
  • Methyltransferases / genetics
  • Methyltransferases / metabolism*
  • Multigene Family
  • Transcription Factors / genetics
  • Transcription Factors / metabolism
  • Up-Regulation

Substances

  • Depsipeptides
  • Fungal Proteins
  • Transcription Factors
  • beauvericin
  • Methyltransferases
  • Histone Deacetylases