Variants in the SMARCA4 gene was associated with coronary heart disease susceptibility in Chinese han population

Oncotarget. 2017 Jan 31;8(5):7350-7356. doi: 10.18632/oncotarget.14387.

Abstract

Background: Coronary heart disease (CHD) is the leading cause of death worldwide. Many single-nucleotide polymorphisms (SNPs) are found to be related to the risk of CHD in previous studies. This study investigated whether polymorphism of SMARCA4 gene is associated with CHD.

Materials and methods: Genotypes at five CHD-relevant SNPs were determined in 456 cases of incident CHD and 685 unaffected controls in Chinese Han population using χ2 test, genetic model analysis and haplotype analysis. We also analysis the differences in continuous variables among the subjects with three genotypes of related genes were assessed using the ANOVA.

Results: We identified two susceptibility SNPs in the SMARCA4 gene that were potentially associated with a decreased risk of CHD. We identified rs11879293 (OR, 0.74; 95% CI, 0.59-0.96; P = 0.012) and rs12232780 (OR, 0.70; 95% CI, 0.54-0.90; P = 0.005) were associated with a decreased risk of CHD risk under the log-additive model adjusted by gender and age. Meanwhile, we also found that significant differences in glucose concentrations with rs11879293 and rs1122608 different genotype. Serum LDL-C and HDL-C were seen among the 3 genotypes of rs12232780 exist differences.

Conclusion: This study provides an evidence for polymorphism of SMARCA4 gene associated with CHD development in Chinese Han population.

Keywords: Pathology Section; SMARCA4; case-control study; coronary heart disease; gene polymorphisms.

MeSH terms

  • Adult
  • Aged
  • Asian People / genetics
  • Case-Control Studies
  • Chi-Square Distribution
  • China / epidemiology
  • Cholesterol, HDL / blood
  • Cholesterol, LDL / blood
  • Coronary Disease / blood
  • Coronary Disease / diagnosis
  • Coronary Disease / ethnology
  • Coronary Disease / genetics*
  • DNA Helicases / genetics*
  • Female
  • Gene Frequency
  • Genetic Association Studies
  • Genetic Markers
  • Genetic Predisposition to Disease
  • Haplotypes
  • Humans
  • Incidence
  • Logistic Models
  • Male
  • Middle Aged
  • Nuclear Proteins / genetics*
  • Odds Ratio
  • Phenotype
  • Polymorphism, Single Nucleotide*
  • Risk Factors
  • Transcription Factors / genetics*

Substances

  • Cholesterol, HDL
  • Cholesterol, LDL
  • Genetic Markers
  • Nuclear Proteins
  • Transcription Factors
  • SMARCA4 protein, human
  • DNA Helicases