Misclassified exposure in epigenetic mediation analyses. Does DNA methylation mediate effects of smoking on birthweight?

Epigenomics. 2017 Mar;9(3):253-265. doi: 10.2217/epi-2016-0145. Epub 2017 Feb 21.

Abstract

Aims: Assessing whether epigenetic alterations mediate associations between environmental exposures and health outcomes is increasingly popular. We investigate the impact of exposure misclassification in such investigations.

Materials & methods: We quantify bias and false-positive rates due to exposure misclassification in mediation analysis and assess the performance of the simulation extrapolation method (SIMEX). We evaluate whether DNA-methylation mediates smoking-birth weight relationship in the Norwegian Mother and Child Study birth cohort.

Results: Ignoring exposure misclassification increases type I error in mediation analysis. The direct effect is underestimated and, when the mediator is a biomarker of the exposure, as is true for smoking, the indirect effect is overestimated.

Conclusion: Misclassification correction plus cautious interpretation are recommended for mediation analyses in the presence of exposure misclassification.

Keywords: DNA methylation; mediation analysis; misclassification.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, N.I.H., Intramural
  • Research Support, N.I.H., Extramural

MeSH terms

  • Adult
  • Bias
  • Birth Weight / genetics*
  • DNA Methylation*
  • Epigenomics / methods
  • Epigenomics / standards*
  • False Positive Reactions
  • Female
  • Fetal Growth Retardation / epidemiology
  • Fetal Growth Retardation / genetics*
  • Genome-Wide Association Study / methods
  • Genome-Wide Association Study / standards*
  • Humans
  • Infant, Newborn
  • Smoking / adverse effects
  • Smoking / epidemiology*
  • Smoking / genetics