The avian retrovirus env gene family: molecular analysis of host range and antigenic variants

J Virol. 1988 Jan;62(1):75-83. doi: 10.1128/JVI.62.1.75-83.1988.

Abstract

The nucleotide sequence of the env gp85-coding domain from two avian sarcoma and leukosis retrovirus isolates was determined to identify host range and antigenic determinants. The predicted amino acid sequence of gp85 from a subgroup D virus isolate of the Schmidt-Ruppin strain of Rous sarcoma virus was compared with the previously reported sequences of subgroup A, B, C, and E avian sarcoma and leukosis retroviruses. Subgroup D viruses are closely related to the subgroup B viruses but have an extended host range that includes the ability to penetrate certain mammalian cells. There are 27 amino acid differences shared between the subgroup D sequence and three subgroup B sequences. At 16 of these sites, the subgroup D sequence is identical to the sequence of one or more of the other subgroup viruses (A, C, and E). The remaining 11 sites are specific to subgroup D and show some clustering in the two large variable regions that are thought to be major determinants of host range. Biological analysis of recombinant viruses containing a dominant selectable marker confirmed the role of the gp85-coding domain in determining the host range of the subgroup D virus in the infection of mammalian cells. We also compared the sequence of the gp85-coding domain from two subgroup A viruses, Rous-associated virus type 1 and a subgroup A virus of the Schmidt-Ruppin strain of Rous sarcoma virus. The comparison revealed 24 nonconservative amino acid changes, of which 6 result in changes in potential glycosylation sites. The positions of 10 amino acid differences are coincident with the positions of 10 differences found between two subgroup B virus env gene sequences. These 10 sites identify seven domains in the sequence which may constitute determinants of type-specific antigenicity. Using a molecular recombinant, we demonstrated that type-specific neutralization of two subgroup A viruses was associated with the gp85-coding domain of the virus.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Alpharetrovirus / genetics*
  • Amino Acid Sequence
  • Animals
  • Antigenic Variation
  • Antigens, Surface / genetics
  • Antigens, Viral / genetics*
  • Base Sequence
  • Chickens / microbiology
  • Genes, Viral
  • Mammals / microbiology
  • Molecular Sequence Data
  • Neutralization Tests
  • Receptors, Virus / physiology
  • Recombination, Genetic
  • Species Specificity
  • Viral Envelope Proteins / genetics*
  • Viral Envelope Proteins / immunology
  • Virus Replication

Substances

  • Antigens, Surface
  • Antigens, Viral
  • Receptors, Virus
  • Viral Envelope Proteins

Associated data

  • GENBANK/M19113
  • GENBANK/M22730