Interferon-Dependent Induction of Clr-b during Mouse Cytomegalovirus Infection Protects Bystander Cells from Natural Killer Cells via NKR-P1B-Mediated Inhibition

J Innate Immun. 2017;9(4):343-358. doi: 10.1159/000454926. Epub 2017 Mar 14.

Abstract

Natural killer (NK) cells are innate lymphocytes that aid in self-nonself discrimination by recognizing cells undergoing pathological alterations. The NKR-P1B inhibitory receptor recognizes Clr-b, a self-encoded marker of cell health downregulated during viral infection. Here, we show that Clr-b loss during mouse cytomegalovirus (MCMV) infection is predicated by a loss of Clr-b (Clec2d) promoter activity and nascent transcripts, driven in part by MCMV ie3 (M122) activity. In contrast, uninfected bystander cells near MCMV-infected fibroblasts reciprocally upregulate Clr-b expression due to paracrine type-I interferon (IFN) signaling. Exposure of fibroblasts to type-I IFN augments Clec2d promoter activity and nascent Clr-b transcripts, dependent upon a cluster of IRF3/7/9 motifs located ∼200 bp upstream of the transcriptional start site. Cells deficient in type-I IFN signaling components revealed IRF9 and STAT1 as key transcription factors involved in Clr-b upregulation. In chromatin immunoprecipitation experiments, the Clec2d IRF cluster recruited STAT2 upon IFN-α exposure, confirming the involvement of ISGF3 (IRF9/STAT1/STAT2) in positively regulating the Clec2d promoter. These findings demonstrate that Clr-b is an IFN-stimulated gene on healthy bystander cells, in addition to a missing-self marker on MCMV-infected cells, and thereby enhances the dynamic range of innate self-nonself discrimination by NK cells.

Keywords: Clec2d; Clr-b; Interferon; Missing-self recognition; Mouse cytomegalovirus; NKR-P1B; Natural killer cell; Paracrine.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Animals
  • Cytotoxicity, Immunologic
  • Fibroblasts / physiology*
  • Herpesviridae Infections / immunology*
  • Immunity, Innate
  • Interferon Type I / metabolism
  • Interferon-Stimulated Gene Factor 3, gamma Subunit / genetics
  • Killer Cells, Natural / immunology*
  • Lectins, C-Type / genetics
  • Lectins, C-Type / metabolism*
  • Mice
  • Mice, 129 Strain
  • Mice, Inbred C57BL
  • Mice, Knockout
  • Muromegalovirus / immunology*
  • NIH 3T3 Cells
  • NK Cell Lectin-Like Receptor Subfamily B / metabolism*
  • Paracrine Communication
  • Promoter Regions, Genetic / genetics
  • Receptors, Immunologic / genetics
  • Receptors, Immunologic / metabolism*
  • STAT1 Transcription Factor / genetics*
  • STAT2 Transcription Factor / genetics

Substances

  • Clec2d protein, mouse
  • IRF9 protein, mouse
  • Interferon Type I
  • Interferon-Stimulated Gene Factor 3, gamma Subunit
  • Klrb1b protein, mouse
  • Lectins, C-Type
  • NK Cell Lectin-Like Receptor Subfamily B
  • Receptors, Immunologic
  • STAT1 Transcription Factor
  • STAT2 Transcription Factor
  • Stat1 protein, mouse

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