Enhanced crude oil biodegradative potential of natural phytoplankton-associated hydrocarbonoclastic bacteria

Environ Microbiol. 2017 Jul;19(7):2843-2861. doi: 10.1111/1462-2920.13811. Epub 2017 Jul 7.

Abstract

Phytoplankton have been shown to harbour a diversity of hydrocarbonoclastic bacteria (HCB), yet it is not understood how these phytoplankton-associated HCB would respond in the event of an oil spill at sea. Here, we assess the diversity and dynamics of the bacterial community associated with a natural population of marine phytoplankton under oil spill-simulated conditions, and compare it to that of the free-living (non phytoplankton-associated) bacterial community. While the crude oil severely impacted the phytoplankton population and was likely conducive to marine oil snow formation, analysis of the MiSeq-derived 16S rRNA data revealed dramatic and differential shifts in the oil-amended communities that included blooms of recognized HCB (e.g., Thalassospira, Cycloclasticus), including putative novel phyla, as well as other groups with previously unqualified oil-degrading potential (Olleya, Winogradskyella, and members of the inconspicuous BD7-3 phylum). Notably, the oil biodegradation potential of the phytoplankton-associated community exceeded that of the free-living community, and it showed a preference to degrade substituted and non-substituted polycyclic aromatic hydrocarbons. Our study provides evidence of compartmentalization of hydrocarbon-degrading capacity in the marine water column, wherein HCB associated with phytoplankton are better tuned to degrading crude oil hydrocarbons than that by the community of planktonic free-living bacteria.

Publication types

  • Research Support, Non-U.S. Gov't

MeSH terms

  • Biodegradation, Environmental*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / metabolism*
  • Petroleum / metabolism*
  • Petroleum Pollution
  • Phytoplankton / microbiology*
  • Piscirickettsiaceae / genetics
  • Piscirickettsiaceae / metabolism*
  • Polycyclic Aromatic Hydrocarbons / metabolism*
  • RNA, Ribosomal, 16S / genetics
  • Rhodospirillaceae / genetics
  • Rhodospirillaceae / metabolism*

Substances

  • Petroleum
  • Polycyclic Aromatic Hydrocarbons
  • RNA, Ribosomal, 16S