Expression of BrpA in Streptococcus mutans is regulated by FNR-box mediated repression

Mol Oral Microbiol. 2017 Dec;32(6):517-525. doi: 10.1111/omi.12193. Epub 2017 Aug 24.

Abstract

Our previous studies showed that brpA in Streptococcus mutans, which encodes a member of the LytR-CpsA-Psr family of proteins, can be co-transcribed with brpB upstream as a bicistronic operon, and the intergenic region also has strong promoter activity. To elucidate how brpA expression is regulated, the promoter regions were analyzed using polymerase chain reaction-based deletions and site-directed mutagenesis and a promoterless luciferase gene as a reporter. Allelic exchange mutagenesis was also used to examine genes encoding putative trans-acting factors, and the impact of such mutations on brpA expression was analyzed by reporter assays. Multiple elements in the short brpA promoter (nucleotide -1 to -344 relative to start cordon ATG) were shown to have a major impact on brpA expression, including an FNR-box, for a putative binding site of an FNR-type of transcriptional regulator. When compared with the intact brpA promoter, mutations of the highly conserved nucleotides in FNR-box from TTGATgtttAcCtt to TTACAgaaaGtTac resulted in 1362-fold increases of luciferase activity (P < .001), indicative of the FNR-box-mediated repression as a major mechanism in regulation of brpA expression. When luciferase reporter was fused to the upstream brpBA promoter (nucleotides -784 to -1144), luciferase activity was decreased by 4.5-fold (P < .001) in the brpA mutant, TW14D, and by 67.7-fold (P < .001) in the brpB mutant, JB409, compared with the wild-type, UA159. However, no such effects were observed when the reporter gene was fused to the short brpA promoter and its derivatives. These results also suggest that brpA expression in S. mutans is auto-regulated through the upstream brpBA promoter.

Keywords: Streptococcus mutans; BrpA; LytR-CpsA-Psr proteins; biofilms; fumarate-nitrate reductase regulator; gene expression.

Publication types

  • Research Support, N.I.H., Extramural

MeSH terms

  • Bacterial Proteins / genetics*
  • Bacterial Proteins / metabolism*
  • Binding Sites
  • DNA, Bacterial / genetics
  • Gene Expression Profiling
  • Gene Expression Regulation, Bacterial*
  • Iron-Sulfur Proteins / genetics*
  • Iron-Sulfur Proteins / metabolism*
  • Luciferases / genetics
  • Luciferases / metabolism
  • Mutagenesis, Site-Directed
  • Operon
  • Promoter Regions, Genetic
  • Streptococcus mutans / genetics*
  • Streptococcus mutans / metabolism*
  • Transcription, Genetic

Substances

  • Bacterial Proteins
  • BrpA protein, Streptococcus mutans
  • DNA, Bacterial
  • Iron-Sulfur Proteins
  • Luciferases