Confluentibacter citreus sp. nov., isolated from lake sediment, and emended description of the genus Confluentibacter

Int J Syst Evol Microbiol. 2017 Oct;67(10):4008-4012. doi: 10.1099/ijsem.0.002239. Epub 2017 Sep 12.

Abstract

A Gram-stain-negative, non-gliding, aerobic and rod-shaped bacterium, designated XJNYT, was isolated from Sayram Lake (44° 30' 30.41″ N 81° 12' 39.55″ E), Xinjiang Province, north-west China, and was characterized taxonomically by a polyphasic study. Strain XJNYT grew at salinities of 0-4 % (w/v) and temperatures of 4-37 °C. The pH range for growth was 6.5-8.5. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain XJNYT belonged to the genus Confluentibacter and was closely related to the type strain of Confluentibacter lentus with 97.8 % similarity. The DNA G+C content was 34.5 mol%. The major fatty acids were iso-C15 : 0, iso-C15 : 1 G, anteiso-C15 : 0, iso-C15 : 0 3-OH, C17 : 0 2-OH and iso-C17 : 0 3-OH. The major respiratory isoprenoid quinone was menaquinone-6 (MK-6) and the polar lipids were phosphatidylethanolamine, an unidentified phospholipid, two unidentified aminolipids and four unidentified lipids. On the basis of morphological, physiological and molecular properties and phylogenetic distinctiveness, strain XJNYT represents a novel species within the genus Confluentibacter, for which the name Confluentibactercitreus sp. nov. is proposed. The type strain is XJNYT (=KCTC 52638T=MCCC 1H00183T).

Keywords: Confluentibacter; Sayram Lake; phenotypic and chemotaxonomic; phylogenetic.

MeSH terms

  • Bacterial Typing Techniques
  • Base Composition
  • China
  • DNA, Bacterial / genetics
  • Fatty Acids / chemistry
  • Flavobacteriaceae / classification*
  • Flavobacteriaceae / genetics
  • Flavobacteriaceae / isolation & purification
  • Geologic Sediments / microbiology*
  • Lakes / microbiology*
  • Phospholipids / chemistry
  • Phylogeny*
  • RNA, Ribosomal, 16S / genetics
  • Sequence Analysis, DNA
  • Vitamin K 2 / analogs & derivatives
  • Vitamin K 2 / chemistry

Substances

  • DNA, Bacterial
  • Fatty Acids
  • Phospholipids
  • RNA, Ribosomal, 16S
  • Vitamin K 2
  • menaquinone 6