Recessive VARS2 mutation underlies a novel syndrome with epilepsy, mental retardation, short stature, growth hormone deficiency, and hypogonadism

Hum Genomics. 2017 Nov 14;11(1):28. doi: 10.1186/s40246-017-0124-4.

Abstract

Background: Most mitochondrial and cytoplasmic aminoacyl-tRNA synthetases (aaRSs) are encoded by nuclear genes. Syndromic disorders resulting from mutation of aaRSs genes display significant phenotypic heterogeneity. We expand aaRSs-related phenotypes through characterization of the clinical and molecular basis of a novel autosomal-recessive syndrome manifesting severe mental retardation, ataxia, speech impairment, epilepsy, short stature, microcephaly, hypogonadism, and growth hormone deficiency.

Results: A G>A variant in exon 29 of VARS2 (c.3650G>A) (NM_006295) was identified in the index case. This homozygous variant was confirmed by Sanger sequencing and segregated with disease in the family studied. The c.3650G>A change results in alteration of arginine to histidine at residue 1217 (R1217H) of the mature protein and is predicted to be pathogenic.

Conclusions: These findings contribute to a growing list of aaRSs disorders, broadens the spectrum of phenotypes attributable to VARS2 mutations, and provides new insight into genotype-phenotype correlations among the mitochondrial synthetase genes.

Keywords: Angelman; Dysmorphism; Hypogonadism; Mitochondrial; Syndromic; Vitamin D deficiency.

MeSH terms

  • Body Height / genetics
  • Chromosome Mapping
  • Epilepsy / genetics*
  • Exome
  • Female
  • Genes, Recessive
  • Growth Disorders / genetics
  • HLA Antigens / genetics*
  • HLA Antigens / metabolism
  • Human Growth Hormone / deficiency*
  • Human Growth Hormone / genetics
  • Humans
  • Hypogonadism / genetics*
  • Intellectual Disability / genetics*
  • Male
  • Pedigree
  • Pregnancy
  • Syndrome
  • Valine-tRNA Ligase / genetics*
  • Valine-tRNA Ligase / metabolism
  • Young Adult

Substances

  • HLA Antigens
  • Human Growth Hormone
  • VARS2 protein, human
  • Valine-tRNA Ligase